U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

J5U23_RS07080 RNA-guided endonuclease TnpB family protein [ Saccharolobus shibatae B12 ]

Gene ID: 65562983, updated on 25-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
J5U23_RS07080
Gene description
RNA-guided endonuclease TnpB family protein
Locus tag
J5U23_RS07080
Gene type
protein coding
Organism
Saccharolobus shibatae B12 (strain: B12, type-material: type strain of Sulfolobus shibatae)
Lineage
Archaea; Thermoproteota; Thermoprotei; Sulfolobales; Sulfolobaceae; Saccharolobus
Old locus tag
J5U23_01398
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help

NZ_CP077717.1Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene hypothetical protein Neighboring gene ATP-binding protein Neighboring gene transposase

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NZ_CP077717.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. New insights into the diversity and evolution of the archaeal mobilome from three complete genomes of Saccharolobus shibatae. Medvedeva S, et al. Environ Microbiol, 2021 Aug. PMID 34190379

GeneRIFs: Gene References Into Functions

General protein information

Go to the top of the page Help
Preferred Names
RNA-guided endonuclease TnpB family protein

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_CP077717.1 Reference assembly

    Range
    1263520..1264749 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_218267361.1 RNA-guided endonuclease TnpB family protein [Saccharolobus shibatae]

    UniProtKB/TrEMBL
    A0A8F5GT34, A0A8F5GWF0
    Conserved Domains (1) summary
    COG0675
    Location:3 → 390
    InsQ; Transposase [Mobilome: prophages, transposons]
Nucleotide Protein
Heading Accession and Version