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Mrpl35 mitochondrial ribosomal protein L35 [ Mus musculus (house mouse) ]

Gene ID: 66223, updated on 27-Nov-2024

Summary

Official Symbol
Mrpl35provided by MGI
Official Full Name
mitochondrial ribosomal protein L35provided by MGI
Primary source
MGI:MGI:1913473
See related
Ensembl:ENSMUSG00000052962 AllianceGenome:MGI:1913473
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
1110066C01Rik
Summary
Predicted to be a structural constituent of ribosome. Located in mitochondrion. Is expressed in several structures, including brain; early conceptus; gonad; heart; and liver. Orthologous to human MRPL35 (mitochondrial ribosomal protein L35). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Ubiquitous expression in testis adult (RPKM 7.1), heart adult (RPKM 6.3) and 28 other tissues See more
Orthologs
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Genomic context

See Mrpl35 in Genome Data Viewer
Location:
6 C1; 6 32.21 cM
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 6 NC_000072.7 (71789981..71800768, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 6 NC_000072.6 (71812997..71823784, complement)

Chromosome 6 - NC_000072.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_16266 Neighboring gene ribosomal protein L19, pseudogene 9 Neighboring gene receptor accessory protein 1 Neighboring gene STARR-seq mESC enhancer starr_16267 Neighboring gene CapStarr-seq enhancer MGSCv37_chr6:71707276-71707477 Neighboring gene CapStarr-seq enhancer MGSCv37_chr6:71707656-71707839 Neighboring gene STARR-seq mESC enhancer starr_16268 Neighboring gene inner membrane protein, mitochondrial Neighboring gene ribosomal protein L7A pseudogene Neighboring gene small nucleolar RNA, C/D box 94 Neighboring gene pentatricopeptide repeat domain 3

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Pathways from PubChem

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in mitochondrial translation NAS
Non-traceable Author Statement
more info
PubMed 
Component Evidence Code Pubs
located_in mitochondrial inner membrane NAS
Non-traceable Author Statement
more info
PubMed 
part_of mitochondrial large ribosomal subunit ISO
Inferred from Sequence Orthology
more info
 
part_of mitochondrial large ribosomal subunit NAS
Non-traceable Author Statement
more info
PubMed 
located_in mitochondrion HDA PubMed 
is_active_in mitochondrion IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in mitochondrion ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
large ribosomal subunit protein bL35m
Names
39S ribosomal protein L35, mitochondrial
L35mt
MRP-L35

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_025430.3NP_079706.1  large ribosomal subunit protein bL35m

    See identical proteins and their annotated locations for NP_079706.1

    Status: VALIDATED

    Source sequence(s)
    AC122200, AK004385, BB615775
    Consensus CDS
    CCDS20234.1
    UniProtKB/Swiss-Prot
    Q9CQL6
    Related
    ENSMUSP00000066493.3, ENSMUST00000065103.4
    Conserved Domains (1) summary
    pfam01632
    Location:102161
    Ribosomal_L35p; Ribosomal protein L35

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000072.7 Reference GRCm39 C57BL/6J

    Range
    71789981..71800768 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)