U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

HDEF_RS06535 type II toxin-antitoxin system YafQ family toxin [ Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum) ]

Gene ID: 66261109, updated on 4-Dec-2024

Summary

Go to the top of the page Help
Gene symbol
HDEF_RS06535
Gene description
type II toxin-antitoxin system YafQ family toxin
Locus tag
HDEF_RS06535
Gene type
protein coding
Organism
Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum) (strain: T5A, nat-host: Acyrthosiphon pisum)
Lineage
Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; aphid secondary symbionts; Candidatus Hamiltonella
Old locus tag
HDEF_1448
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Sequence:
NC_012751.1 (1328932..1329213)

NC_012751.1Genomic Context describing neighboring genes Neighboring gene terminase large subunit Neighboring gene phage terminase small subunit P27 family Neighboring gene type II toxin-antitoxin system RelB/DinJ family antitoxin Neighboring gene hypothetical protein Neighboring gene HNH endonuclease

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_012751.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Hamiltonella defensa, genome evolution of protective bacterial endosymbiont from pathogenic ancestors. Degnan PH, et al. Proc Natl Acad Sci U S A, 2009 Jun 2. PMID 19451630, Free PMC Article

GeneRIFs: Gene References Into Functions

General protein information

Go to the top of the page Help
Preferred Names
type II toxin-antitoxin system YafQ family toxin

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_012751.1 Reference assembly

    Range
    1328932..1329213
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_015873849.1 type II toxin-antitoxin system YafQ family toxin [Candidatus Hamiltonella defensa]

    See identical proteins and their annotated locations for WP_015873849.1

    UniProtKB/TrEMBL
    C4K681
    Conserved Domains (1) summary
    pfam15738
    Location:2 → 91
    YafQ_toxin; Bacterial toxin of type II toxin-antitoxin system, YafQ
Nucleotide Protein
Heading Accession and Version