U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC6629610 transcription factor Ouib [ Drosophila virilis ]

Gene ID: 6629610, updated on 10-May-2024

Summary

Go to the top of the page Help
Gene symbol
LOC6629610
Gene description
transcription factor Ouib
Locus tag
Dvir_GJ22679
See related
EnsemblRapid:LOC6629610
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila virilis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila
Also known as
GJ22679; GJ22679-PB
Orthologs
fruit fly all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC6629610 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
103 current DvirRS2 (GCF_003285735.1) Unplaced Scaffold NW_022587574.1 (5992244..5996645)

NW_022587574.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC6629260 Neighboring gene transcription factor Ouib Neighboring gene uncharacterized LOC26530412 Neighboring gene zinc finger protein 850 Neighboring gene transcription factor Ouib Neighboring gene VPS35 endosomal protein sorting factor-like Neighboring gene PP2C-like domain-containing protein CG9801

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_022587574 Unplaced Scaffold Reference DvirRS2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
transcription factor Ouib
Names
Dvir\GJ22679
Dvir\GJ22679-PB
dvir_GLEANR_8058

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Drosophila virilis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DvirRS2

Genomic

  1. NW_022587574.1 Reference DvirRS2

    Range
    5992244..5996645
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002054639.3 → XP_002054675.3  transcription factor Ouib

    UniProtKB/TrEMBL
    B4LZG0
    Related
    XP_002054675.3, XM_002054639.3
    Conserved Domains (5) summary
    smart00868
    Location:5 → 78
    zf-AD; Zinc-finger associated domain (zf-AD)
    COG5048
    Location:175 → 322
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:255 → 275
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam12874
    Location:309 → 333
    zf-met; Zinc-finger of C2H2 type
    pfam13465
    Location:270 → 292
    zf-H2C2_2; Zinc-finger double domain
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials