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E6A31_RS11435 IS1380-like element IS1678 family transposase [ Enterococcus faecium ]

Gene ID: 66455288, updated on 3-Dec-2024

Summary

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Gene symbol
E6A31_RS11435
Gene description
IS1380-like element IS1678 family transposase
Locus tag
E6A31_RS11435
Gene type
protein coding
Organism
Enterococcus faecium (strain: SRR24, nat-host: Homo sapiens)
Lineage
Bacteria; Bacillota; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus
Old locus tag
E6A31_12110
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Genomic context

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NZ_CP038996.1Genomic Context describing neighboring genes Neighboring gene GHKL domain-containing protein Neighboring gene EntF family bacteriocin induction factor Neighboring gene bacteriocin immunity protein Neighboring gene class II bacteriocin

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_CP038996.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Top-Down Genomic Surveillance Approach To Investigate the Genomic Epidemiology and Antibiotic Resistance Patterns of Enterococcus faecium Detected in Cancer Patients in Arkansas. Udaondo Z, et al. Microbiol Spectr, 2023 Jun 15. PMID 36995227, Free PMC Article
  2. Exploring bacterial insertion sequences with ISfinder: objectives, uses, and future developments. Siguier P, et al. Methods Mol Biol, 2012. PMID 22367867

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
IS1380-like element IS1678 family transposase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_CP038996.1 Reference assembly

    Range
    2329860..2331179
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_000202380.1 MULTISPECIES: IS1380-like element IS1678 family transposase [Bacilli]

    See identical proteins and their annotated locations for WP_000202380.1

    UniProtKB/TrEMBL
    A0A133CR14, A0A377NQU9, A0A437UFF8, A0A828ZPC3, A0A9P2S5N4, A0AAV3GZ00
    Conserved Domains (1) summary
    pfam13701
    Location:9 → 437
    DDE_Tnp_1_4; Transposase DDE domain group 1
Nucleotide Protein
Heading Accession and Version