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tnpA IS200/IS605-like element ISEfa4 family transposase [ Enterococcus faecium ]

Gene ID: 66455821, updated on 3-Dec-2024

Summary

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Gene symbol
tnpA
Gene description
IS200/IS605-like element ISEfa4 family transposase
Locus tag
E6A31_RS14115
Gene type
protein coding
Organism
Enterococcus faecium (strain: SRR24, nat-host: Homo sapiens)
Lineage
Bacteria; Bacillota; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus
Old locus tag
E6A31_14970
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Genomic context

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Location:
plasmid: pSRR24

NZ_CP038997.1Genomic Context describing neighboring genes Neighboring gene replication initiation protein Neighboring gene type II toxin-antitoxin system HicB family antitoxin Neighboring gene IS200/IS605 family element RNA-guided endonuclease TnpB Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_CP038997.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Presence of pRI1: a small cryptic mobilizable plasmid isolated from Enterococcus faecium of human and animal origin. Garcia-Migura L, et al. Curr Microbiol, 2009 Feb. PMID 18830745
  2. Exploring bacterial insertion sequences with ISfinder: objectives, uses, and future developments. Siguier P, et al. Methods Mol Biol, 2012. PMID 22367867

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
IS200/IS605-like element ISEfa4 family transposase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_CP038997.1 Reference assembly

    Range
    97399..97803
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_002287522.1 MULTISPECIES: IS200/IS605-like element ISEfa4 family transposase [Bacteria]

    See identical proteins and their annotated locations for WP_002287522.1

    UniProtKB/TrEMBL
    A0A2A4DMD4, A0A2S7MFV8, A0A376L502, A0A9P2S3J8, A0AAV3DSR7, A0AAV3E379, A0AAV3GUY0, Q3Y111, Q8GF06, S1RLW6
    Conserved Domains (1) summary
    NF033573
    Location:3 → 128
    transpos_IS200; IS200/IS605 family transposase
Nucleotide Protein
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Molecular Biology Databases