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Vmn1r57 vomeronasal 1 receptor 57 [ Mus musculus (house mouse) ]

Gene ID: 665150, updated on 27-Nov-2024

Summary

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Official Symbol
Vmn1r57provided by MGI
Official Full Name
vomeronasal 1 receptor 57provided by MGI
Primary source
MGI:MGI:3646165
See related
Ensembl:ENSMUSG00000091652 AllianceGenome:MGI:3646165
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm7519; EG665150
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Genomic context

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See Vmn1r57 in Genome Data Viewer
Location:
7 A1; 7 3.02 cM
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (5223477..5224409)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (5220478..5221410)

Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene vomeronasal 1 receptor 55 Neighboring gene vomeronasal 1 receptor 56 Neighboring gene predicted gene, 23942 Neighboring gene NLR family, pyrin domain containing 2 Neighboring gene predicted gene, 18757

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual annotation and analysis of the defensin gene cluster in the C57BL/6J mouse reference genome. Amid C, et al. BMC Genomics, 2009 Dec 15. PMID 20003482, Free PMC Article
  2. Extreme variability among mammalian V1R gene families. Young JM, et al. Genome Res, 2010 Jan. PMID 19952141, Free PMC Article
  3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
vomeronasal 1 receptor 57
Names
vomernasal 1 receptor Vmn1r57

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001166734.1 → NP_001160206.1  vomeronasal 1 receptor 57

    Status: PROVISIONAL

    Source sequence(s)
    AC162893
    Consensus CDS
    CCDS51984.1
    UniProtKB/TrEMBL
    K7N731, Q24JU6
    Related
    ENSMUSP00000131917.2, ENSMUST00000170780.2
    Conserved Domains (1) summary
    pfam03402
    Location:33 → 284
    V1R; Vomeronasal organ pheromone receptor family, V1R

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000073.7 Reference GRCm39 C57BL/6J

    Range
    5223477..5224409
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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