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E5165_RS12460 alpha-amylase family glycosyl hydrolase [ Flavobacterium psychrophilum ]

Gene ID: 66553937, updated on 31-Mar-2024

Summary

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Gene symbol
E5165_RS12460
Gene description
alpha-amylase family glycosyl hydrolase
Locus tag
E5165_RS12460
Gene type
protein coding
Organism
Flavobacterium psychrophilum (strain: 160401-1/5N, nat-host: rainbow trout)
Lineage
Bacteria; Bacteroidota; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium
Old locus tag
E5165_01640
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Genomic context

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NZ_CP039120.2Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene glycerophosphodiester phosphodiesterase family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_CP039120.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Crystal structure of yellow meal worm alpha-amylase at 1.64 A resolution. Strobl S, et al. J Mol Biol, 1998 May 8. PMID 9600843
  2. Refined molecular structure of pig pancreatic alpha-amylase at 2.1 A resolution. Larson SB, et al. J Mol Biol, 1994 Feb 4. PMID 8107092

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
alpha-amylase family glycosyl hydrolase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_CP039120.2 Reference assembly

    Range
    2812637..2814043
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_038503865.1 alpha-amylase family glycosyl hydrolase [Flavobacterium psychrophilum]

    See identical proteins and their annotated locations for WP_038503865.1

    UniProtKB/TrEMBL
    A0A7U2NG43
    Conserved Domains (1) summary
    cd11313
    Location:39 → 388
    AmyAc_arch_bac_AmyA; Alpha amylase catalytic domain found in archaeal and bacterial Alpha-amylases (also called 1,4-alpha-D-glucan-4-glucanohydrolase)
Nucleotide Protein
Heading Accession and Version