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Prb1c proline-rich protein BstNI subfamily 1C [ Mus musculus (house mouse) ]

Gene ID: 667929, updated on 27-Nov-2024

Summary

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Official Symbol
Prb1cprovided by MGI
Official Full Name
proline-rich protein BstNI subfamily 1Cprovided by MGI
Primary source
MGI:MGI:3645847
See related
Ensembl:ENSMUSG00000030143 AllianceGenome:MGI:3645847
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm8882; EG667929
Summary
Orthologous to several human genes including PRR4 (proline rich 4); PRB1 (proline rich protein BstNI subfamily 1); and PRB2 (proline rich protein BstNI subfamily 2). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See Prb1c in Genome Data Viewer
Location:
6 G1; 6 64.03 cM
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 6 NC_000072.7 (132338068..132341097, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 6 NC_000072.6 (132361105..132364134, complement)

Chromosome 6 - NC_000072.7Genomic Context describing neighboring genes Neighboring gene cyclin-dependent kinase 4 pseudogene Neighboring gene STARR-seq mESC enhancer starr_17505 Neighboring gene proline-rich protein BstNI subfamily 1B Neighboring gene DnaJ (Hsp40) homolog, subfamily A, member 1 pseudogene Neighboring gene cyclin-dependent kinase 4 pseudogene Neighboring gene predicted gene 5154

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
proline-rich protein BstNI subfamily 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001177588.1 → NP_001171059.1  proline-rich protein BstNI subfamily 1-like precursor

    Status: VALIDATED

    Source sequence(s)
    AC163675
    Consensus CDS
    CCDS57459.1
    UniProtKB/TrEMBL
    E9Q7E4
    Related
    ENSMUSP00000079660.6, ENSMUST00000080849.6

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000072.7 Reference GRCm39 C57BL/6J

    Range
    132338068..132341097 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials