U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Speer1f spermatogenesis associated glutamate (E)-rich protein 1F [ Mus musculus (house mouse) ]

Gene ID: 667961, updated on 17-Aug-2024

Summary

Go to the top of the page Help
Official Symbol
Speer1fprovided by MGI
Official Full Name
spermatogenesis associated glutamate (E)-rich protein 1Fprovided by MGI
Primary source
MGI:MGI:3779819
See related
Ensembl:ENSMUSG00000096732 AllianceGenome:MGI:3779819
Gene type
pseudo
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm8897
Expression
Restricted expression toward testis adult (RPKM 52.4) See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See Speer1f in Genome Data Viewer
Location:
5 A1; 5 3.85 cM
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (11466247..11471196)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (11416280..11421229)

Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer mm9_chr5:11341911-11342211 Neighboring gene RIKEN cDNA 1700108N06 gene Neighboring gene spermatogenesis associated glutamate (E)-rich protein 1A Neighboring gene anaphase-promoting complex subunit 5 pseudogene Neighboring gene STARR-positive B cell enhancer mm9_chr5:11422147-11422448 Neighboring gene predicted gene, 52803 Neighboring gene predicted gene, 29745 Neighboring gene STARR-positive B cell enhancer mm9_chr5:11447084-11447384 Neighboring gene STARR-seq mESC enhancer starr_12433 Neighboring gene RIKEN cDNA 4930437M23 gene

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help
  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000071.7 Reference GRCm39 C57BL/6J

    Range
    11466247..11471196
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_376764.4 RNA Sequence

    Related
    ENSMUST00000167041.9
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.