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tssB type VI secretion system contractile sheath small subunit [ Pantoea agglomerans ]

Gene ID: 66825106, updated on 3-Dec-2024

Summary

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Gene symbol
tssB
Gene description
type VI secretion system contractile sheath small subunit
Locus tag
I6L77_RS07980
Gene type
protein coding
Organism
Pantoea agglomerans (strain: FDAARGOS 1447, culture-collection: DSM:3493, type-material: type strain of Pantoea agglomerans)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Erwiniaceae; Pantoea; Pantoea agglomerans group
Old locus tag
I6L77_07980
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Genomic context

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NZ_CP077366.1Genomic Context describing neighboring genes Neighboring gene EamA family transporter Neighboring gene AraC family transcriptional regulator Neighboring gene pseudo Neighboring gene pseudo Neighboring gene type VI secretion system lipoprotein TssJ Neighboring gene type VI secretion system baseplate subunit TssE

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_CP077366.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Remodelling of VipA/VipB tubules by ClpV-mediated threading is crucial for type VI protein secretion. Bönemann G, et al. EMBO J, 2009 Feb 18. PMID 19131969, Free PMC Article
  2. Structure of the type VI secretion system contractile sheath. Kudryashev M, et al. Cell, 2015 Feb 26. PMID 25723169, Free PMC Article
  3. Dissection of the TssB-TssC interface during type VI secretion sheath complex formation. Zhang XY, et al. PLoS One, 2013. PMID 24282569, Free PMC Article
  4. A virulence locus of Pseudomonas aeruginosa encodes a protein secretion apparatus. Mougous JD, et al. Science, 2006 Jun 9. PMID 16763151, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
type VI secretion system contractile sheath small subunit

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_CP077366.1 Reference assembly

    Range
    1726237..1726737
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_010671384.1 MULTISPECIES: type VI secretion system contractile sheath small subunit [Pantoea]

    See identical proteins and their annotated locations for WP_010671384.1

    UniProtKB/TrEMBL
    A0A1I4WNJ1, A0A356RWR6
    Conserved Domains (1) summary
    pfam05591
    Location:7 → 157
    T6SS_VipA; Type VI secretion system, VipA, VC_A0107 or Hcp2
Nucleotide Protein
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