1700010I14Rik RIKEN cDNA 1700010I14 gene [Mus musculus (house mouse)] - Gene

Summary

Official Symbol: 1700010I14Rikprovided by MGI
Official Full Name: RIKEN cDNA 1700010I14 geneprovided by MGI
Primary source: MGI:MGI:1914181
See related: Ensembl:ENSMUSG00000023873 AllianceGenome:MGI:1914181
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Mus musculus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Summary: Is expressed in ileum; male reproductive gland or organ; and midbrain. Orthologous to human C6orf118 (chromosome 6 open reading frame 118). [provided by Alliance of Genome Resources, Nov 2024]
Expression: Restricted expression toward testis adult (RPKM 80.5) See more
Orthologs: human all
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Genomic context

Location:: 17 A1; 17 5.53 cM

Exon count:: 11

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCm39 (GCF_000001635.27)	17	NC_000083.7 (9207152..9227151)
108.20200622	previous assembly	GRCm38.p6 (GCF_000001635.26)	17	NC_000083.6 (8988320..9008319)

Chromosome 17 - NC_000083.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Mouse ENCODE transcriptome data
Description: RNA profiling data sets generated by the Mouse ENCODE project.
BioProject: PRJNA66167
Publication: PMID 25409824
Analysis date: n/a

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Testis-specific proteins, TSNAXIP1 and 1700010I14RIK, are important for sperm motility and male fertility in mice.
Title: Testis-specific proteins, TSNAXIP1 and 1700010I14RIK, are important for sperm motility and male fertility in mice.

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Variation

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Alleles

Alleles of this type are documented at Mouse Genome Informatics (MGI)

Endonuclease-mediated (1) 1 citation
Targeted (2)

General gene information

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Markers

NoName (e-PCR)
- UniSTS:237568

D17Pri3 (e-PCR), detects polymorphism
- UniSTS:142157

Gene Ontology Provided by MGI

Function	Evidence Code	Pubs
enables molecular_function	ND No biological Data available more info

Process	Evidence Code	Pubs
involved_in biological_process	ND No biological Data available more info

Component	Evidence Code	Pubs
is_active_in cellular_component	ND No biological Data available more info

General protein information

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Preferred Names: uncharacterized protein C6orf118 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001347544.1 → NP_001334473.1 uncharacterized protein C6orf118 homolog isoform 2

Status: VALIDATED

Source sequence(s)

AC122893, AK005830, AK161278, AV257018

Consensus CDS

CCDS84275.1

UniProtKB/TrEMBL

Q7TPG0, Q9DAH6

Related

ENSMUSP00000024650.6, ENSMUST00000024650.12
NM_025851.3 → NP_080127.2 uncharacterized protein C6orf118 homolog isoform 1

See identical proteins and their annotated locations for NP_080127.2

Status: VALIDATED

Source sequence(s)

AC122893, AK006307, AV257018, BC050753

Consensus CDS

CCDS28385.2

UniProtKB/TrEMBL

A0A3B2W887, Q3TTN6

Related

ENSMUSP00000118841.2, ENSMUST00000151609.2

Conserved Domains (3) summary

pfam14235
Location:351 → 418

DUF4337; Domain of unknown function (DUF4337)

pfam15739
Location:242 → 344

TSNAXIP1_N; Translin-associated factor X-interacting N-terminus

cl17173
Location:431 → 482

AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...