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RhiXN_12302 Ras-related protein Rab-4B [ Rhizoctonia solani ]

Gene ID: 67034580, updated on 7-Dec-2023

Summary

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Gene symbol
RhiXN_12302
Gene description
Ras-related protein Rab-4B
Locus tag
RhiXN_12302
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Rhizoctonia solani (strain: AG-1 IA, isolate: XN)
Lineage
Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes; Cantharellales; Ceratobasidiaceae; Rhizoctonia
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Genomic context

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See RhiXN_12302 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
7
Sequence:
Chromosome: 15; NC_057384.1 (1660439..1661504, complement)

Chromosome 15 - NC_057384.1Genomic Context describing neighboring genes Neighboring gene Cys/Met metabolism PLP-dependent enzyme Neighboring gene Cys/Met metabolism PLP-dependent enzyme Neighboring gene RNA-directed DNA polymerase from transposon BS Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_057384.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of endocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Ras-related protein Rab-4B

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_057384.1 Reference assembly

    Range
    1660439..1661504 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_043332117.1 → XP_043186878.1  Ras-related protein Rab-4B [Rhizoctonia solani]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0B7FYQ5, A0A8H8P6R8
    Conserved Domains (1) summary
    cl38936
    Location:21 → 181
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
Nucleotide Protein
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