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1700025F24Rik RIKEN cDNA 1700025F24 gene [ Mus musculus (house mouse) ]

Gene ID: 67081, updated on 22-Oct-2024

Summary

Official Symbol
1700025F24Rikprovided by MGI
Official Full Name
RIKEN cDNA 1700025F24 geneprovided by MGI
Primary source
MGI:MGI:1914331
See related
Ensembl:ENSMUSG00000100558 AllianceGenome:MGI:1914331
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Biased expression in testis adult (RPKM 6.9) and CNS E11.5 (RPKM 0.3) See more
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Genomic context

See 1700025F24Rik in Genome Data Viewer
Location:
10; 10 D2
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 10 NC_000076.7 (119249349..119262769)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 10 NC_000076.6 (119413444..119426864)

Chromosome 10 - NC_000076.7Genomic Context describing neighboring genes Neighboring gene proteasome (prosome, macropain) subunit, alpha type 1 pseudogene Neighboring gene predicted gene, 40778 Neighboring gene STARR-seq mESC enhancer starr_28043 Neighboring gene STARR-seq mESC enhancer starr_28044 Neighboring gene glutamate receptor interacting protein 1 Neighboring gene predicted gene, 47342 Neighboring gene STARR-seq mESC enhancer starr_28045 Neighboring gene predicted gene, 40780

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_040578.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AK006336, AK015773
    Related
    ENSMUST00000185238.3

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000076.7 Reference GRCm39 C57BL/6J

    Range
    119249349..119262769
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)