U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Fndc10 fibronectin type III domain containing 10 [ Rattus norvegicus (Norway rat) ]

Gene ID: 680656, updated on 4-Jan-2025

Summary

Go to the top of the page Help
Symbol
Fndc10provided by RGD
Full Name
fibronectin type III domain containing 10provided by RGD
Primary source
RGD:1589420
See related
EnsemblRapid:ENSRNOG00000030447 AllianceGenome:RGD:1589420
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary
Predicted to be located in membrane. Orthologous to human FNDC10 (fibronectin type III domain containing 10). [provided by Alliance of Genome Resources, Jan 2025]
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See Fndc10 in Genome Data Viewer
Location:
5q36
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 5 NC_086023.1 (171581960..171584519)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 5 NC_051340.1 (166299587..166311477)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 5 NC_005104.4 (173139345..173141564)

Chromosome 5 - NC_086023.1Genomic Context describing neighboring genes Neighboring gene eukaryotic translation elongation factor 1 gamma, pseudogene 6 Neighboring gene transfer RNA serine (anticodon AGA) 54 Neighboring gene SSU72 homolog, RNA polymerase II CTD phosphatase Neighboring gene U6 spliceosomal RNA Neighboring gene transmembrane protein 240 Neighboring gene ATPase family, AAA domain containing 3A

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Genome sequence of the Brown Norway rat yields insights into mammalian evolution. Gibbs RA, et al. Nature, 2004 Apr 1. PMID 15057822
  2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Markers

Homology

Gene Ontology Provided by RGD

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

Go to the top of the page Help
Preferred Names
fibronectin type III domain-containing protein 10
Names
Fibronectin type-III domain-containing transmembrane protein C1orf233 homolog

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001419679.1 → NP_001406608.1  fibronectin type III domain-containing protein 10 precursor

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000005
    UniProtKB/Swiss-Prot
    D4A2Q0
    Related
    ENSRNOP00000101778.1, ENSRNOT00000155533.1

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086023.1 Reference GRCr8

    Range
    171581960..171584519
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063288393.1 → XP_063144463.1  fibronectin type III domain-containing protein 10 isoform X1

    UniProtKB/Swiss-Prot
    D4A2Q0
    Related
    ENSRNOP00000100986.1, ENSRNOT00000170981.1
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
D4A2Q0.1 GenPept UniProtKB/Swiss-Prot:D4A2Q0

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.