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2900060B14Rik RIKEN cDNA 2900060B14 gene [ Mus musculus (house mouse) ]

Gene ID: 68204, updated on 26-Oct-2024

Summary

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Official Symbol
2900060B14Rikprovided by MGI
Official Full Name
RIKEN cDNA 2900060B14 geneprovided by MGI
Primary source
MGI:MGI:1915454
See related
AllianceGenome:MGI:1915454
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
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Genomic context

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See 2900060B14Rik in Genome Data Viewer
Location:
1 E2.3; 1 52.14 cM
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 1 NC_000067.7 (118386399..118386995, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 1 NC_000067.6 (118458669..118459265, complement)

Chromosome 1 - NC_000067.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_01976 Neighboring gene STARR-positive B cell enhancer mm9_chr1:120284737-120285037 Neighboring gene STARR-positive B cell enhancer mm9_chr1:120285334-120285635 Neighboring gene STARR-positive B cell enhancer mm9_chr1:120285732-120286033 Neighboring gene STARR-positive B cell enhancer ABC_E10028 Neighboring gene STARR-seq mESC enhancer starr_01978 Neighboring gene STARR-seq mESC enhancer starr_01979 Neighboring gene predicted gene 28867 Neighboring gene CLIP associating protein 1 Neighboring gene STARR-positive B cell enhancer mm9_chr1:120355892-120356193 Neighboring gene CapStarr-seq enhancer MGSCv37_chr1:120356261-120356370 Neighboring gene predicted gene, 26080 Neighboring gene STARR-seq mESC enhancer starr_01983 Neighboring gene STARR-seq mESC enhancer starr_01987 Neighboring gene STARR-seq mESC enhancer starr_01991 Neighboring gene transcription factor CP2-like 1 Neighboring gene STARR-seq mESC enhancer starr_01996 Neighboring gene predicted gene, 23497 Neighboring gene STARR-seq mESC enhancer starr_01999 Neighboring gene GLI-Kruppel family member GLI2 Neighboring gene predicted gene, 51642 Neighboring gene microRNA 6346

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
  2. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
  3. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article
  4. Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes. Carninci P, et al. Genome Res, 2000 Oct. PMID 11042159, Free PMC Article
  5. Functional annotation of a full-length mouse cDNA collection. Kawai J, et al. Nature, 2001 Feb 8. PMID 11217851

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_027901.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AK083371

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000067.7 Reference GRCm39 C57BL/6J

    Range
    118386399..118386995 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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