U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

H2az2l1 H2A.Z histone variant 2 like 1 [ Rattus norvegicus (Norway rat) ]

Gene ID: 685069, updated on 14-Nov-2024

Summary

Go to the top of the page Help
Official Symbol
H2az2l1provided by RGD
Official Full Name
H2A.Z histone variant 2 like 1provided by RGD
Primary source
RGD:1583233
See related
EnsemblRapid:ENSRNOG00000031564 AllianceGenome:RGD:1583233
Gene type
protein coding
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary
Predicted to enable protein heterodimerization activity. Predicted to be a structural constituent of chromatin. [provided by Alliance of Genome Resources, Nov 2024]
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See H2az2l1 in Genome Data Viewer
Location:
4q42
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 4 NC_086022.1 (152825302..152825956, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 4 NC_051339.1 (151152904..151153567, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 4 NC_005103.4 (150029954..150030549, complement)

Chromosome 4 - NC_086022.1Genomic Context describing neighboring genes Neighboring gene heterogeneous nuclear ribonucleoprotein F Neighboring gene FXYD domain-containing ion transport regulator 4 Neighboring gene uncharacterized LOC120102376 Neighboring gene uncharacterized LOC134486839 Neighboring gene RasGEF domain family, member 1A

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Markers

Homology

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
  
enables protein heterodimerization activity IEA
Inferred from Electronic Annotation
more info
  

General protein information

Go to the top of the page Help
Preferred Names
histone H2A.V-like; similar to H2A histone family, member V isoform 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086022.1 Reference GRCr8

    Range
    152825302..152825956 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006237209.5 → XP_006237271.1  histone H2A.V-like

    See identical proteins and their annotated locations for XP_006237271.1

    UniProtKB/TrEMBL
    A0A8I5ZYU7
    Related
    ENSRNOP00000065187.3, ENSRNOT00000052280.6
    Conserved Domains (2) summary
    PTZ00017
    Location:3 → 128
    PTZ00017; histone H2A; Provisional
    cd00074
    Location:8 → 122
    H2A; Histone 2A; H2A is a subunit of the nucleosome. The nucleosome is an octamer containing two H2A, H2B, H3, and H4 subunits. The H2A subunit performs essential roles in maintaining structural integrity of the nucleosome, chromatin condensation, and binding ...
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials
Tools