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1110032F04Rik RIKEN cDNA 1110032F04 gene [ Mus musculus (house mouse) ]

Gene ID: 68725, updated on 27-Nov-2024

Summary

Official Symbol
1110032F04Rikprovided by MGI
Official Full Name
RIKEN cDNA 1110032F04 geneprovided by MGI
Primary source
MGI:MGI:1915975
See related
Ensembl:ENSMUSG00000046999 AllianceGenome:MGI:1915975
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Summary
Predicted to be located in membrane. Orthologous to human C3orf80 (chromosome 3 open reading frame 80). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs
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Genomic context

See 1110032F04Rik in Genome Data Viewer
Location:
3 E1; 3 32.06 cM
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 3 NC_000069.7 (68776684..68779496)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 3 NC_000069.6 (68869586..68872163)

Chromosome 3 - NC_000069.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 35584 Neighboring gene STARR-seq mESC enhancer starr_07913 Neighboring gene spermine synthase pseudogene Neighboring gene STARR-seq mESC enhancer starr_07914 Neighboring gene intraflagellar transport 80 Neighboring gene oxysterol binding protein-like 9 pseudogene Neighboring gene STARR-seq mESC enhancer starr_07915 Neighboring gene STARR-seq mESC enhancer starr_07916 Neighboring gene STARR-seq mESC enhancer starr_07917 Neighboring gene STARR-positive B cell enhancer ABC_E3436 Neighboring gene microRNA 15b Neighboring gene structural maintenance of chromosomes 4

Genomic regions, transcripts, and products

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
uncharacterized membrane protein C3orf80 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001167996.2NP_001161468.1  uncharacterized membrane protein C3orf80 homolog precursor

    See identical proteins and their annotated locations for NP_001161468.1

    Status: VALIDATED

    Source sequence(s)
    AC115062
    Consensus CDS
    CCDS50931.1
    UniProtKB/Swiss-Prot
    E9Q0B3, Q8C4H3
    Related
    ENSMUSP00000056782.3, ENSMUST00000054551.3
    Conserved Domains (1) summary
    pfam15843
    Location:46247
    DUF4719; Domain of unknown function (DUF4719)

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000069.7 Reference GRCm39 C57BL/6J

    Range
    68776684..68779496
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)