Slc16a9 solute carrier family 16, member 9 [Rattus norvegicus (Norway rat)] - Gene

Summary

Symbol: Slc16a9provided by RGD
Full Name: solute carrier family 16, member 9provided by RGD
Primary source: RGD:1596295
See related: EnsemblRapid:ENSRNOG00000049063 AllianceGenome:RGD:1596295
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Rattus norvegicus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as: MCT 9; AABR07044759.1
Summary: Enables creatine transmembrane transporter activity. Involved in creatine transmembrane transport. Located in plasma membrane. Orthologous to human SLC16A9 (solute carrier family 16 member 9). [provided by Alliance of Genome Resources, Jan 2025]
Expression: Biased expression in Kidney (RPKM 212.8), Lung (RPKM 65.9) and 7 other tissues See more
Orthologs: human mouse all
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Genomic context

Location:: 20p11

Exon count:: 8

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCr8 (GCF_036323735.1)	20	NC_086038.1 (18334946..18376195, complement)
RS_2023_06	previous assembly	mRatBN7.2 (GCF_015227675.2)	20	NC_051355.1 (18335862..18377125, complement)
106	previous assembly	Rnor_6.0 (GCF_000001895.5)	20	NC_005119.4 (19634280..19675358, complement)

Chromosome 20 - NC_086038.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
BioProject: PRJNA238328
Publication: PMID 24510058
Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by RGD

Function	Evidence Code	Pubs
enables carnitine transmembrane transporter activity	ISO Inferred from Sequence Orthology more info
enables creatine transmembrane transporter activity	IMP Inferred from Mutant Phenotype more info	PubMed
enables creatine transmembrane transporter activity	ISO Inferred from Sequence Orthology more info
enables monocarboxylic acid transmembrane transporter activity	IBA Inferred from Biological aspect of Ancestor more info

Process	Evidence Code	Pubs
involved_in carboxylic acid transmembrane transport	IBA Inferred from Biological aspect of Ancestor more info
involved_in carnitine transmembrane transport	ISO Inferred from Sequence Orthology more info
involved_in creatine transmembrane transport	IMP Inferred from Mutant Phenotype more info	PubMed
involved_in creatine transmembrane transport	ISO Inferred from Sequence Orthology more info
involved_in urate metabolic process	ISO Inferred from Sequence Orthology more info

Component	Evidence Code	Pubs
is_active_in plasma membrane	IBA Inferred from Biological aspect of Ancestor more info
located_in plasma membrane	IDA Inferred from Direct Assay more info	PubMed
located_in plasma membrane	ISO Inferred from Sequence Orthology more info

General protein information

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Preferred Names: monocarboxylate transporter 9

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001421109.1 → NP_001408038.1 monocarboxylate transporter 9

Status: VALIDATED

Source sequence(s)

JAXUCZ010000020

UniProtKB/Swiss-Prot

M0RCI4

UniProtKB/TrEMBL

A6JKR0

Related

ENSRNOP00000067303.3, ENSRNOT00000074657.4

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

NC_086038.1 Reference GRCr8

Range

18334946..18376195 complement

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_039099159.2 → XP_038955087.1 monocarboxylate transporter 9 isoform X2

Conserved Domains (1) summary

cl28910
Location:1 → 320

MFS; Major Facilitator Superfamily
XM_039099158.2 → XP_038955086.1 monocarboxylate transporter 9 isoform X1

Conserved Domains (1) summary

cl28910
Location:8 → 340

MFS; Major Facilitator Superfamily