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LOC691414 hypothetical protein LOC691414 [ Rattus norvegicus (Norway rat) ]

Gene ID: 691414, updated on 3-Dec-2024

Summary

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Symbol
LOC691414provided by RGD
Full Name
hypothetical protein LOC691414provided by RGD
Primary source
RGD:1583959
See related
AllianceGenome:RGD:1583959
Gene type
protein coding
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Expression
Biased expression in Adrenal (RPKM 386.0), Testes (RPKM 326.1) and 1 other tissue See more
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Genomic context

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See LOC691414 in Genome Data Viewer
Location:
9q12
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 9 NC_086027.1 (17274997..17308446)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 9 NC_051344.1 (9954720..9964136, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 9 NC_005108.4 (8281747..8442062)

Chromosome 9 - NC_086027.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC134480531 Neighboring gene uncharacterized LOC134480530 Neighboring gene reticulocalbin-1-like Neighboring gene uncharacterized LOC134480550

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
girdin-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086027.1 Reference GRCr8

    Range
    17274997..17308446
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063268076.1 → XP_063124146.1  girdin-like isoform X2

    UniProtKB/TrEMBL
    A0A8I6AHR2

  2. XM_063268077.1 → XP_063124147.1  girdin-like isoform X2

    UniProtKB/TrEMBL
    A0A8I6AHR2

  3. XM_063268078.1 → XP_063124148.1  girdin-like isoform X3

    UniProtKB/TrEMBL
    A0A8I6AHA9

  4. XM_063268075.1 → XP_063124145.1  girdin-like isoform X1

    UniProtKB/TrEMBL
    A0A8I6AHA9
Nucleotide Protein Strain
Heading Accession and Version

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