U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

1700010J16Rik RIKEN cDNA 1700010J16 gene [ Mus musculus (house mouse) ]

Gene ID: 69355, updated on 22-Oct-2024

Summary

Official Symbol
1700010J16Rikprovided by MGI
Official Full Name
RIKEN cDNA 1700010J16 geneprovided by MGI
Primary source
MGI:MGI:1916605
See related
Ensembl:ENSMUSG00000100314 AllianceGenome:MGI:1916605
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Restricted expression toward testis adult (RPKM 2.1) See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See 1700010J16Rik in Genome Data Viewer
Location:
10; 10 D2
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 10 NC_000076.7 (112562831..112621504)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 10 NC_000076.6 (112726926..112785599)

Chromosome 10 - NC_000076.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_27901 Neighboring gene STARR-seq mESC enhancer starr_27902 Neighboring gene potassium voltage gated channel, Shaw-related subfamily, member 2 Neighboring gene STARR-seq mESC enhancer starr_27903 Neighboring gene STARR-seq mESC enhancer starr_27905 Neighboring gene STARR-seq mESC enhancer starr_27906 Neighboring gene predicted gene, 40764 Neighboring gene STARR-seq mESC enhancer starr_27907 Neighboring gene STARR-positive B cell enhancer ABC_E10644 Neighboring gene STARR-seq mESC enhancer starr_27908 Neighboring gene STARR-seq mESC enhancer starr_27909 Neighboring gene predicted gene 3942 Neighboring gene ataxin 7-like 3B

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_040579.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC153929, AK005834
    Related
    ENSMUST00000189116.3

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000076.7 Reference GRCm39 C57BL/6J

    Range
    112562831..112621504
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)