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traF type-F conjugative transfer system pilin assembly protein TraF [ Citrobacter werkmanii ]

Gene ID: 69484211, updated on 6-Jun-2024

Summary

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Gene symbol
traF
Gene description
type-F conjugative transfer system pilin assembly protein TraF
Locus tag
FOB24_RS00645
Gene type
protein coding
Organism
Citrobacter werkmanii (strain: FDAARGOS_616, nat-host: Homo sapiens, culture-collection: FDA:FDAARGOS_616)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex
Old locus tag
FOB24_00645
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Genomic context

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Location:
plasmid: unnamed1

NZ_CP044100.1Genomic Context describing neighboring genes Neighboring gene type-F conjugative transfer system protein TraW Neighboring gene conjugal transfer pilus assembly protein TraU Neighboring gene hypothetical protein Neighboring gene type-F conjugative transfer system pilin assembly protein TrbC Neighboring gene type-F conjugative transfer system mating-pair stabilization protein TraN Neighboring gene type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB Neighboring gene conjugal transfer pilus assembly protein TraH

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_CP044100.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. F-like type IV secretion systems encode proteins with thioredoxin folds that are putative DsbC homologues. Elton TC, et al. J Bacteriol, 2005 Dec. PMID 16321931, Free PMC Article
  2. The product of the F plasmid transfer operon gene, traF, is a periplasmic protein. Wu JH, et al. J Bacteriol, 1988 Aug. PMID 3042757, Free PMC Article
  3. Mobile genetic elements: the agents of open source evolution. Frost LS, et al. Nat Rev Microbiol, 2005 Sep. PMID 16138100

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
type-F conjugative transfer system pilin assembly protein TraF

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_CP044100.1 Reference assembly

    Range
    110194..110970
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_001203361.1 MULTISPECIES: type-F conjugative transfer system pilin assembly protein TraF [Enterobacteriaceae]

    See identical proteins and their annotated locations for WP_001203361.1

    UniProtKB/TrEMBL
    A0A0D7LE58, A0A8H9NZ29
    Conserved Domains (1) summary
    TIGR02739
    Location:4 → 258
    TraF; type-F conjugative transfer system pilin assembly protein TraF
Nucleotide Protein
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