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FOB24_RS02410 helix-turn-helix domain-containing protein [ Citrobacter werkmanii ]

Gene ID: 69484559, updated on 3-Dec-2024

Summary

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Gene symbol
FOB24_RS02410
Gene description
helix-turn-helix domain-containing protein
Locus tag
FOB24_RS02410
Gene type
protein coding
Organism
Citrobacter werkmanii (strain: FDAARGOS_616, nat-host: Homo sapiens, culture-collection: FDA:FDAARGOS_616)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex
Old locus tag
FOB24_02410
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Genomic context

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NZ_CP044101.1Genomic Context describing neighboring genes Neighboring gene AzlD domain-containing protein Neighboring gene AzlC family ABC transporter permease Neighboring gene L-rhamnose mutarotase Neighboring gene lactaldehyde reductase Neighboring gene rhamnulose-1-phosphate aldolase

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_CP044101.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Citrobacter freundii fitness during bloodstream infection. Anderson MT, et al. Sci Rep, 2018 Aug 7. PMID 30087402, Free PMC Article
  2. DNA-binding proteins and evolution of transcription regulation in the archaea. Aravind L, et al. Nucleic Acids Res, 1999 Dec 1. PMID 10556324, Free PMC Article
  3. Cupins: the most functionally diverse protein superfamily? Dunwell JM, et al. Phytochemistry, 2004 Jan. PMID 14697267
  4. Molecular evolution of helix-turn-helix proteins. Rosinski JA, et al. J Mol Evol, 1999 Sep. PMID 10473770
  5. The many faces of the helix-turn-helix domain: transcription regulation and beyond. Aravind L, et al. FEMS Microbiol Rev, 2005 Apr. PMID 15808743

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
helix-turn-helix domain-containing protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_CP044101.1 Reference assembly

    Range
    356508..357056
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_003825255.1 MULTISPECIES: helix-turn-helix domain-containing protein [Citrobacter]

    See identical proteins and their annotated locations for WP_003825255.1

    UniProtKB/TrEMBL
    A0A2Z3WZL5, A0A4P6WKR5, A0A4U6LZW6, A0A5A9CA67, A0A5P2M6L6, A0A658P274, A0A7X1BSY0, A0AAE3RPH9, A0AAP5UIL2, A0AAU7HJZ7, A0AAW7EQH2, A0AAW7GG96, A0AAX0LST0
    Conserved Domains (2) summary
    cd00093
    Location:9 → 66
    HTH_XRE; Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.
    cd02209
    Location:96 → 179
    cupin_XRE_C; XRE (Xenobiotic Response Element) family transcriptional regulators, C-terminal cupin domain
Nucleotide Protein
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