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ybeD DUF493 family protein YbeD [ Citrobacter werkmanii ]

Gene ID: 69485804, updated on 3-Dec-2024

Summary

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Gene symbol
ybeD
Gene description
DUF493 family protein YbeD
Locus tag
FOB24_RS08725
Gene type
protein coding
Organism
Citrobacter werkmanii (strain: FDAARGOS_616, nat-host: Homo sapiens, culture-collection: FDA:FDAARGOS_616)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex
Old locus tag
FOB24_08725
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Genomic context

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NZ_CP044101.1Genomic Context describing neighboring genes Neighboring gene lipoyl synthase Neighboring gene lipoyl(octanoyl) transferase LipB Neighboring gene D-alanyl-D-alanine carboxypeptidase DacA Neighboring gene endolytic peptidoglycan transglycosylase RlpA

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_CP044101.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new regulatory mechanism for bacterial lipoic acid synthesis. Zhang H, et al. Microbiologyopen, 2015 Apr. PMID 25611823, Free PMC Article
  2. Structural similarity of YbeD protein from Escherichia coli to allosteric regulatory domains. Kozlov G, et al. J Bacteriol, 2004 Dec. PMID 15547281, Free PMC Article
  3. Citrobacter freundii fitness during bloodstream infection. Anderson MT, et al. Sci Rep, 2018 Aug 7. PMID 30087402, Free PMC Article

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
DUF493 family protein YbeD

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_CP044101.1 Reference assembly

    Range
    1720687..1720950 complement
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_003022706.1 MULTISPECIES: DUF493 family protein YbeD [Enterobacteriaceae]

    See identical proteins and their annotated locations for WP_003022706.1

    UniProtKB/TrEMBL
    A0A0A5T1P8, A0A0J1LM14, A0A0J1N3I5, A0A1R0G0Y0, A0A212I5H1, A0A2Z3X9U7, A0A3D2BBW0, A0A3E1ZYU4, A0A3E2KWE1, A0A4P6WLD3, A0A4U6MPA2, A0A5A9CK86, A0A5P2MAE8, A0A658NYL9, A0A6I6DGQ0, A0A6N6JXN8, A0A7L6CHC3, A0A7T0H264, A0A7W2XCC0, A0A7X1BK44, A0A9J6Q0C7, A0A9J6QJZ5, A0A9X1K262, A0AAD0GFE2, A0AAD0LM04, A0AAE2JEA8, A0AAE3UTZ0, A0AAE7I1T0, A0AAJ4F3F1, A0AAN0MXS8, A0AAP4FTI4, A0AAP5UHG9, A0AAU7GLB4, A0AAU7HFZ5, A0AAU7IJV8, A0AAW7ENQ2, A0AAW7FA14, A0AAW7FUP5, A0AAW7G4R1, A0AAW7GQT4, A0AAW7H3V4, A0AAX0M556, D4BCH9, R8WZR8
    Conserved Domains (1) summary
    PRK04998
    Location:1 → 87
    PRK04998; hypothetical protein; Provisional
Nucleotide Protein
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