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bopC type III secretion system effector BopC [ Bordetella pertussis ]

Gene ID: 69600230, updated on 1-Aug-2024

Summary

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Gene symbol
bopC
Gene description
type III secretion system effector BopC
Locus tag
CXD86_RS01670
Gene type
protein coding
Organism
Bordetella pertussis (strain: H640, nat-host: Homo sapiens)
Lineage
Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella
Also known as
bteA
Old locus tag
CXD86_01670
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Genomic context

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NZ_CP025371.1Genomic Context describing neighboring genes Neighboring gene LysR family transcriptional regulator Neighboring gene hypothetical protein Neighboring gene pseudo Neighboring gene site-specific integrase Neighboring gene helix-turn-helix domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_CP025371.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Inherent Minor Conformer of Bordetella Effector BteA Directs Chaperone-Mediated Unfolding. Yahalom A, et al. J Am Chem Soc, 2022 Jul 6. PMID 35749268
  2. BopC is a novel type III effector secreted by Bordetella bronchiseptica and has a critical role in type III-dependent necrotic cell death. Kuwae A, et al. J Biol Chem, 2006 Mar 10. PMID 16407269
  3. VFDB: a reference database for bacterial virulence factors. Chen L, et al. Nucleic Acids Res, 2005 Jan 1. PMID 15608208, Free PMC Article

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Inherent Minor Conformer of Bordetella Effector BteA Directs Chaperone-Mediated Unfolding.
    Title: Inherent Minor Conformer of Bordetella Effector BteA Directs Chaperone-Mediated Unfolding.
Submit: New GeneRIF Correction

General protein information

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Preferred Names
type III secretion system effector BopC

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_CP025371.1 Reference assembly

    Range
    325150..327120
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_010929841.1 type III secretion system effector BopC [Bordetella pertussis]

    See identical proteins and their annotated locations for WP_010929841.1

    UniProtKB/TrEMBL
    A0A381ABV9, A0AAI9NFX7, Q7VSD3
    Conserved Domains (2) summary
    pfam11516
    Location:115 → 220
    DUF3220; Protein of unknown function (DUF3120)
    cd21073
    Location:31 → 119
    toxin_BteA-MLD_like; membrane localization domain (MLD) of BteA (Bordetella T3SS effector A) cytotoxin, the N-terminal domain of Photox toxin and related proteins
Nucleotide Protein
Heading Accession and Version