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CXD86_RS19710 helix-turn-helix transcriptional regulator [ Bordetella pertussis ]

Gene ID: 69603710, updated on 1-Aug-2024

Summary

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Gene symbol
CXD86_RS19710
Gene description
helix-turn-helix transcriptional regulator
Locus tag
CXD86_RS19710
Gene type
protein coding
Organism
Bordetella pertussis (strain: H640, nat-host: Homo sapiens)
Lineage
Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella
Old locus tag
CXD86_19640
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Genomic context

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NZ_CP025371.1Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene A/G-specific adenine glycosylase Neighboring gene class I SAM-dependent methyltransferase Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_CP025371.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Resolving the complex Bordetella pertussis genome using barcoded nanopore sequencing. Ring N, et al. Microb Genom, 2018 Nov. PMID 30461375, Free PMC Article
  2. The helix-turn-helix DNA binding motif. Brennan RG, et al. J Biol Chem, 1989 Feb 5. PMID 2644244

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
helix-turn-helix transcriptional regulator

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_CP025371.1 Reference assembly

    Range
    4049876..4050685 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_003815084.1 MULTISPECIES: helix-turn-helix transcriptional regulator [Bordetella]

    See identical proteins and their annotated locations for WP_003815084.1

    UniProtKB/TrEMBL
    A0A0C6P7X5, A0A0H3LSK5, A0A0T7CIX0, A0A380ZYI8, A0AAI9NEF7, K0MNG9, Q7VST6, Q7W3P9
    Conserved Domains (2) summary
    pfam13560
    Location:43 → 98
    HTH_31; Helix-turn-helix domain
    pfam17765
    Location:120 → 268
    MLTR_LBD; MmyB-like transcription regulator ligand binding domain
Nucleotide Protein
Heading Accession and Version

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