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F0316_RS19365 type II toxin-antitoxin system RelE/ParE family toxin [ Vibrio cholerae ]

Gene ID: 69722219, updated on 3-Dec-2024

Summary

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Gene symbol
F0316_RS19365
Gene description
type II toxin-antitoxin system RelE/ParE family toxin
Locus tag
F0316_RS19365
Gene type
protein coding
Organism
Vibrio cholerae (strain: RFB16)
Lineage
Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio
Old locus tag
F0316_19370
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Genomic context

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Location:
chromosome: 2

2 - NZ_CP043556.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene Dabb family protein Neighboring gene type II toxin-antitoxin system Phd/YefM family antitoxin Neighboring gene glutathione S-transferase family protein Neighboring gene pseudo

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_CP043556.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Characterization of 3 Megabase-Sized Circular Replicons from Vibrio cholerae. Okada K, et al. Emerg Infect Dis, 2015 Jul. PMID 26079534, Free PMC Article
  2. Evolving new protein-protein interaction specificity through promiscuous intermediates. Aakre CD, et al. Cell, 2015 Oct 22. PMID 26478181, Free PMC Article
  3. Interaction specificity, toxicity and regulation of a paralogous set of ParE/RelE-family toxin-antitoxin systems. Fiebig A, et al. Mol Microbiol, 2010 Jul 1. PMID 20487277, Free PMC Article
  4. A conserved mode of protein recognition and binding in a ParD-ParE toxin-antitoxin complex. Dalton KM, et al. Biochemistry, 2010 Mar 16. PMID 20143871, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
type II toxin-antitoxin system RelE/ParE family toxin

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_CP043556.1 Reference assembly

    Range
    1053129..1053419 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_000221352.1 MULTISPECIES: type II toxin-antitoxin system RelE/ParE family toxin [Vibrio]

    See identical proteins and their annotated locations for WP_000221352.1

    UniProtKB/TrEMBL
    A0A0H3AG88, A0A0K9UHE1, A0A0X1KZP5, C3LV66, H9L4R3, Q08799, Q7DCP5
    Conserved Domains (1) summary
    COG2026
    Location:1 → 89
    RelE; mRNA-degrading endonuclease RelE, toxin component of the RelBE toxin-antitoxin system [Defense mechanisms]
Nucleotide Protein
Heading Accession and Version

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