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Fam241b family with sequence similarity 241, member B [ Mus musculus (house mouse) ]

Gene ID: 69894, updated on 27-Nov-2024

Summary

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Official Symbol
Fam241bprovided by MGI
Official Full Name
family with sequence similarity 241, member Bprovided by MGI
Primary source
MGI:MGI:1917144
See related
Ensembl:ENSMUSG00000020083 AllianceGenome:MGI:1917144
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
2010107G23Rik
Summary
Predicted to be located in membrane. Predicted to be active in intracellular membrane-bounded organelle. Is expressed in central nervous system; dorsal root ganglion; epithelium; and submandibular gland primordium. Orthologous to human FAM241B (family with sequence similarity 241 member B). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Broad expression in CNS E18 (RPKM 22.5), CNS E14 (RPKM 13.4) and 19 other tissues See more
Orthologs
human all
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Genomic context

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See Fam241b in Genome Data Viewer
Location:
10 B4; 10 32.34 cM
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 10 NC_000076.7 (61943435..61946829, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 10 NC_000076.6 (62107656..62111050, complement)

Chromosome 10 - NC_000076.7Genomic Context describing neighboring genes Neighboring gene collagen, type XIII, alpha 1 Neighboring gene STARR-seq mESC enhancer starr_26865 Neighboring gene ribosomal protein L7A pseudogene Neighboring gene STARR-seq mESC enhancer starr_26870 Neighboring gene STARR-seq mESC enhancer starr_26872 Neighboring gene argininosuccinate synthase pseudogene Neighboring gene STARR-seq mESC enhancer starr_26874 Neighboring gene neurogenin 3 Neighboring gene STARR-positive B cell enhancer mm9_chr10:61645889-61646190 Neighboring gene tetraspanin 15 Neighboring gene microRNA 7662

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. Integrating genetic and network analysis to characterize genes related to mouse weight. Ghazalpour A, et al. PLoS Genet, 2006 Aug 18. PMID 16934000, Free PMC Article
  2. Protein-protein interaction panel using mouse full-length cDNAs. Suzuki H, et al. Genome Res, 2001 Oct. PMID 11591653, Free PMC Article
  3. Identification of transcripts with enriched expression in the developing and adult pancreas. Hoffman BG, et al. Genome Biol, 2008. PMID 18554416, Free PMC Article
  4. Database resources of the National Center for Biotechnology Information. Wheeler DL, et al. Nucleic Acids Res, 2001 Jan 1. PMID 11125038, Free PMC Article
  5. Cell-Type-Specific Gene Expression in Developing Mouse Neocortex: Intermediate Progenitors Implicated in Axon Development. Bedogni F, et al. Front Mol Neurosci, 2021. PMID 34321999, Free PMC Article

See all (21) citations in PubMed

GeneRIFs: Gene References Into Functions

Variation

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Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (2) 

General gene information

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Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in intracellular membrane-bounded organelle IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
protein FAM241B
Names
uncharacterized protein C10orf35 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001358252.1 → NP_001345181.1  protein FAM241B

    Status: VALIDATED

    Source sequence(s)
    AC127417, AK008338, AK035688, DN174360
    Consensus CDS
    CCDS23886.1
    UniProtKB/Swiss-Prot
    Q9D882
    UniProtKB/TrEMBL
    D3YYX8
    Related
    ENSMUSP00000116424.2, ENSMUST00000142796.8
    Conserved Domains (1) summary
    pfam15378
    Location:62 → 91
    DUF4605; Domain of unknown function (DUF4605)

  2. NM_001358253.1 → NP_001345182.1  protein FAM241B

    Status: VALIDATED

    Source sequence(s)
    AC127417
    Consensus CDS
    CCDS23886.1
    UniProtKB/Swiss-Prot
    Q9D882
    UniProtKB/TrEMBL
    D3YYX8
    Related
    ENSMUSP00000118912.2, ENSMUST00000124615.8
    Conserved Domains (1) summary
    pfam15378
    Location:62 → 91
    DUF4605; Domain of unknown function (DUF4605)

  3. NM_027251.4 → NP_081527.1  protein FAM241B

    See identical proteins and their annotated locations for NP_081527.1

    Status: VALIDATED

    Source sequence(s)
    AK035688, DN174360
    Consensus CDS
    CCDS23886.1
    UniProtKB/Swiss-Prot
    Q9D882
    UniProtKB/TrEMBL
    D3YYX8
    Related
    ENSMUSP00000115865.2, ENSMUST00000125704.8
    Conserved Domains (1) summary
    pfam15378
    Location:62 → 91
    DUF4605; Domain of unknown function (DUF4605)

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000076.7 Reference GRCm39 C57BL/6J

    Range
    61943435..61946829 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9D882.1 GenPept UniProtKB/Swiss-Prot:Q9D882

Gene LinkOut

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