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smpB SsrA-binding protein SmpB [ Enterococcus faecium ]

Gene ID: 70761998, updated on 3-Dec-2024

Summary

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Gene symbol
smpB
Gene description
SsrA-binding protein SmpB
Locus tag
E6A31_RS14515
Gene type
protein coding
Organism
Enterococcus faecium (strain: SRR24, nat-host: Homo sapiens)
Lineage
Bacteria; Bacillota; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus
Old locus tag
E6A31_09680
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Genomic context

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NZ_CP038996.1Genomic Context describing neighboring genes Neighboring gene ATP synthase F0 subunit C Neighboring gene F0F1 ATP synthase subunit A Neighboring gene ribonuclease R Neighboring gene alpha/beta fold hydrolase

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_CP038996.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Top-Down Genomic Surveillance Approach To Investigate the Genomic Epidemiology and Antibiotic Resistance Patterns of Enterococcus faecium Detected in Cancer Patients in Arkansas. Udaondo Z, et al. Microbiol Spectr, 2023 Jun 15. PMID 36995227, Free PMC Article
  2. Cell cycle-regulated degradation of tmRNA is controlled by RNase R and SmpB. Hong SJ, et al. Mol Microbiol, 2005 Jul. PMID 15978085, Free PMC Article
  3. Independent binding sites of small protein B onto transfer-messenger RNA during trans-translation. Metzinger L, et al. Nucleic Acids Res, 2005. PMID 15860775, Free PMC Article
  4. Comparative 3-D modeling of tmRNA. Burks J, et al. BMC Mol Biol, 2005 Jun 15. PMID 15958166, Free PMC Article
  5. A previously uncharacterized role for small protein B (SmpB) in transfer messenger RNA-mediated trans-translation. Sundermeier TR, et al. Proc Natl Acad Sci U S A, 2005 Feb 15. PMID 15699355, Free PMC Article

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
SsrA-binding protein SmpB

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_CP038996.1 Reference assembly

    Range
    1879775..1880239 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_002292799.1 MULTISPECIES: SsrA-binding protein SmpB [Enterococcus]

    See identical proteins and their annotated locations for WP_002292799.1

    UniProtKB/TrEMBL
    A0A132P869, A0A242DZK2, A0A3N3SEI4, A0A4Y3JNB0, A0A7W1XGG0, A0A829A6F5, A0A829FF86, A0A9P2S670, A0AAV3GZJ4, A0AAV3L1S6, A0AAW9N354, J6Y5N2, R2PDV5
    Conserved Domains (1) summary
    pfam01668
    Location:9 → 151
    SmpB; SmpB protein
Nucleotide Protein
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