U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Hsfy2 heat shock transcription factor, Y-linked 2 [ Mus musculus (house mouse) ]

Gene ID: 71066, updated on 4-Jan-2025

Summary

Official Symbol
Hsfy2provided by MGI
Official Full Name
heat shock transcription factor, Y-linked 2provided by MGI
Primary source
MGI:MGI:1918316
See related
Ensembl:ENSMUSG00000045336 AllianceGenome:MGI:1918316
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Hspy2l; 4933413G11Rik
Summary
Predicted to enable sequence-specific double-stranded DNA binding activity. Predicted to be located in cytosol and nucleoplasm. Orthologous to human HSFY1 (heat shock transcription factor Y-linked 1) and HSFY2 (heat shock transcription factor Y-linked 2). [provided by Alliance of Genome Resources, Jan 2025]
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See Hsfy2 in Genome Data Viewer
Location:
1 C1.3; 1 28.72 cM
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 1 NC_000067.7 (56675203..56676610, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 1 NC_000067.6 (56636044..56637451, complement)

Chromosome 1 - NC_000067.7Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA 1700003I22 gene Neighboring gene VISTA enhancer mm613 Neighboring gene STARR-seq mESC enhancer starr_00963 Neighboring gene STARR-seq mESC enhancer starr_00964 Neighboring gene predicted gene, 53554 Neighboring gene STARR-seq mESC enhancer starr_00966 Neighboring gene STARR-seq mESC enhancer starr_00967 Neighboring gene STARR-seq mESC enhancer starr_00969 Neighboring gene STARR-seq mESC enhancer starr_00971 Neighboring gene STARR-seq mESC enhancer starr_00972 Neighboring gene STARR-seq mESC enhancer starr_00973 Neighboring gene special AT-rich sequence binding protein 2 Neighboring gene STARR-seq mESC enhancer starr_00974 Neighboring gene RIKEN cDNA 9130024F11 gene Neighboring gene predicted gene, 51624 Neighboring gene STARR-seq mESC enhancer starr_00975

Genomic regions, transcripts, and products

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (2) 

General protein information

Preferred Names
heat shock transcription factor, Y-linked
Names
heat shock transcription factor, Y linked 2 like

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_027661.2NP_081937.1  heat shock transcription factor, Y-linked

    See identical proteins and their annotated locations for NP_081937.1

    Status: VALIDATED

    Source sequence(s)
    AC131083, BC049724, CN832499
    Consensus CDS
    CCDS14964.1
    UniProtKB/TrEMBL
    Q80Y37, Q9D449
    Related
    ENSMUSP00000049715.5, ENSMUST00000062085.6
    Conserved Domains (1) summary
    pfam00447
    Location:86194
    HSF_DNA-bind; HSF-type DNA-binding

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000067.7 Reference GRCm39 C57BL/6J

    Range
    56675203..56676610 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)