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4933428M09Rik RIKEN cDNA 4933428M09 gene [ Mus musculus (house mouse) ]

Gene ID: 71248, updated on 27-Nov-2024

Summary

Official Symbol
4933428M09Rikprovided by MGI
Official Full Name
RIKEN cDNA 4933428M09 geneprovided by MGI
Primary source
MGI:MGI:1918498
See related
Ensembl:ENSMUSG00000042525 AllianceGenome:MGI:1918498
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Restricted expression toward testis adult (RPKM 8.3) See more
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Genomic context

See 4933428M09Rik in Genome Data Viewer
Location:
X F1; X 61.27 cM
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) X NC_000086.8 (138079977..138081758)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) X NC_000086.7 (139179228..139181009)

Chromosome X - NC_000086.8Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA 4930513O06 gene Neighboring gene CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2 pseudogene Neighboring gene PWWP domain containing 3B Neighboring gene pluripotency associated transcript 21 Neighboring gene STARR-seq mESC enhancer starr_47991 Neighboring gene tumor rejection antigen P1A

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

General protein information

Preferred Names
uncharacterized protein LOC71248
Names
novel aspartic/glutamic acid-rich region containing protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001357856.1NP_001344785.1  uncharacterized protein LOC71248

    Status: VALIDATED

    Source sequence(s)
    AK016974, AL732419
    Consensus CDS
    CCDS90757.1
    UniProtKB/TrEMBL
    Q9D3X3
    Related
    ENSMUSP00000108669.2, ENSMUST00000113046.2

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000086.8 Reference GRCm39 C57BL/6J

    Range
    138079977..138081758
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)