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METD_RS22095 CarD family transcriptional regulator [ Methylorubrum extorquens DM4 ]

Gene ID: 72991593, updated on 15-May-2024

Summary

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Gene symbol
METD_RS22095
Gene description
CarD family transcriptional regulator
Locus tag
METD_RS22095
Gene type
protein coding
Organism
Methylorubrum extorquens DM4 (strain: DM4, type-material: type strain of Methylobacterium dichloromethanicum)
Lineage
Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales; Methylobacteriaceae; Methylorubrum
Old locus tag
METD_I4866; METDI4866
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Genomic context

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Sequence:
NC_012988.1 (4755372..4755962)

NC_012988.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene ferredoxin FdxA Neighboring gene RNA polymerase factor sigma-32 Neighboring gene pseudo

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_012988.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Structure and function of CarD, an essential mycobacterial transcription factor. Srivastava DB, et al. Proc Natl Acad Sci U S A, 2013 Jul 30. PMID 23858468, Free PMC Article
  2. CdnL, a member of the large CarD-like family of bacterial proteins, is vital for Myxococcus xanthus and differs functionally from the global transcriptional regulator CarD. García-Moreno D, et al. Nucleic Acids Res, 2010 Aug. PMID 20371514, Free PMC Article
  3. Recruitment of a novel zinc-bound transcriptional factor by a bacterial HMGA-type protein is required for regulating multiple processes in Myxococcus xanthus. Peñalver-Mellado M, et al. Mol Microbiol, 2006 Aug. PMID 16879646
  4. Domain architecture of a high mobility group A-type bacterial transcriptional factor. Padmanabhan S, et al. J Biol Chem, 2001 Nov 9. PMID 11533063
  5. High mobility group I(Y)-like DNA-binding domains on a bacterial transcription factor. Nicolas FJ, et al. Proc Natl Acad Sci U S A, 1996 Jul 9. PMID 8692912, Free PMC Article

See all (8) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
CarD family transcriptional regulator

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_012988.1 Reference assembly

    Range
    4755372..4755962
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_003599510.1 MULTISPECIES: CarD family transcriptional regulator [Methylobacteriaceae]

    See identical proteins and their annotated locations for WP_003599510.1

    UniProtKB/TrEMBL
    A0A1S1P0B5, B7L162, C5B274, H1KHQ0
    Conserved Domains (1) summary
    cl00588
    Location:12 → 172
    CarD_CdnL_TRCF; CarD-like/TRCF domain

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