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PKNH_1332700 60S ribosomal protein L21, putative [ Plasmodium knowlesi strain H ]

Gene ID: 7322849, updated on 5-Sep-2024

Summary

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Gene symbol
PKNH_1332700
Gene description
60S ribosomal protein L21, putative
Locus tag
PKNH_1332700
See related
PlasmoDB:PKNH_1332700; VEuPathDB:PKNH_1332700
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Plasmodium knowlesi strain H (strain: H)
Lineage
Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Plasmodium)
Old locus tag
PKH_132430
Orthologs
Plasmodium falciparum all
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Genomic context

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See PKNH_1332700 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
1
Sequence:
Chromosome: 13; NC_011914.2 (1502965..1503450)

Chromosome 13 - NC_011914.2Genomic Context describing neighboring genes Neighboring gene protein arginine N-methyltransferase 1, putative Neighboring gene transcription factor BTF3, putative Neighboring gene conserved Plasmodium protein, unknown function Neighboring gene conserved Plasmodium protein, unknown function

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_011914.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of the simian and human malaria parasite Plasmodium knowlesi. Pain A, et al. Nature, 2008 Oct 9. PMID 18843368, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of cytosolic large ribosomal subunit IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
60S ribosomal protein L21, putative

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_011914.2 Reference assembly

    Range
    1502965..1503450
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002260727.1 → XP_002260763.1  60S ribosomal protein L21, putative [Plasmodium knowlesi strain H]

    See identical proteins and their annotated locations for XP_002260763.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A1A7VCI9, A0A1Y3DU61, A0A384KXJ1, A0A5K1UGM1, B3LAD1
    Conserved Domains (1) summary
    PTZ00189
    Location:2 → 161
    PTZ00189; 60S ribosomal protein L21; Provisional
Nucleotide Protein
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