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LOC732740 Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A [ Zea mays ]

Gene ID: 732740, updated on 27-Nov-2024

Summary

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Gene symbol
LOC732740
Gene description
Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A
Locus tag
ZEAMMB73_Zm00001d036031
See related
EnsemblRapid:Zm00001eb269610
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Zea mays
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Also known as
pco067871; GRMZM2G164352
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Genomic context

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See LOC732740 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
12
Annotation release Status Assembly Chr Location
103 current Zm-B73-REFERENCE-NAM-5.0 (GCF_902167145.1) 6 NC_050101.1 (73882472..73889287)
102.20200423 previous assembly B73 RefGen_v4 (GCF_000005005.2) 6 NC_024464.2 (67349219..67356034)

Chromosome 6 - NC_050101.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC103629424 Neighboring gene uncharacterized LOC100277170 Neighboring gene uncharacterized LOC109940262 Neighboring gene peptidyl-prolyl cis-trans isomerase-like 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Maize rough sheath2 and its Arabidopsis orthologue ASYMMETRIC LEAVES1 interact with HIRA, a predicted histone chaperone, to maintain knox gene silencing and determinacy during organogenesis. Phelps-Durr TL, et al. Plant Cell, 2005 Nov. PMID 16243907, Free PMC Article
  2. Characterization of the maize endosperm transcriptome and its comparison to the rice genome. Lai J, et al. Genome Res, 2004 Oct. PMID 15466291, Free PMC Article
  3. Deep sampling of the Palomero maize transcriptome by a high throughput strategy of pyrosequencing. Vega-Arreguín JC, et al. BMC Genomics, 2009 Jul 6. PMID 19580677, Free PMC Article
  4. The B73 maize genome: complexity, diversity, and dynamics. Schnable PS, et al. Science, 2009 Nov 20. PMID 19965430
  5. Sequencing, mapping, and analysis of 27,455 maize full-length cDNAs. Soderlund C, et al. PLoS Genet, 2009 Nov. PMID 19936069, Free PMC Article

See all (8) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein phosphatase regulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of protein phosphatase type 2A complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform; uncharacterized protein LOC732740
Names
pco067871(258)
protein phosphatase 2A regulatory subunit A

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001112369.1 → NP_001105839.1  Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform

    See identical proteins and their annotated locations for NP_001105839.1

    Status: PROVISIONAL

    Source sequence(s)
    AY940682
    UniProtKB/TrEMBL
    Q32SG2
    Related
    Zm00001eb269610_P001, Zm00001eb269610_T001
    Conserved Domains (2) summary
    sd00044
    Location:243 → 267
    HEAT; HEAT repeat [structural motif]
    pfam13646
    Location:366 → 461
    HEAT_2; HEAT repeats

RefSeqs of Annotated Genomes: Zea mays Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

Genomic

  1. NC_050101.1 Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

    Range
    73882472..73889287
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008650108.2 → XP_008648330.1  uncharacterized protein LOC732740 isoform X2

    See identical proteins and their annotated locations for XP_008648330.1

    UniProtKB/TrEMBL
    A0A1D6LKF6
    Related
    Zm00001eb269610_P003, Zm00001eb269610_T003
    Conserved Domains (2) summary
    sd00044
    Location:243 → 267
    HEAT; HEAT repeat [structural motif]
    pfam13646
    Location:366 → 461
    HEAT_2; HEAT repeats

  2. XM_020539211.3 → XP_020394800.1  uncharacterized protein LOC732740 isoform X1

    UniProtKB/TrEMBL
    A0A804PVM7
    Related
    Zm00001eb269610_P004, Zm00001eb269610_T004
    Conserved Domains (3) summary
    sd00044
    Location:243 → 267
    HEAT; HEAT repeat [structural motif]
    pfam13646
    Location:366 → 461
    HEAT_2; HEAT repeats
    cl26104
    Location:43 → 301
    HEAT_2; HEAT repeats
Nucleotide Protein
Heading Accession and Version

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