U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

CG42305 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 7354382, updated on 9-Dec-2024

Summary

Go to the top of the page Help
Official Symbol
CG42305provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0259201
Locus tag
Dmel_CG42305
See related
AllianceGenome:FB:FBgn0259201
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
Dmel\CG42305; Dromel_CG17325_FBtr0081102_uORF
Summary
Is expressed in embryonic dorsal epidermis; embryonic head epidermis; and embryonic ventral epidermis. [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See CG42305 in Genome Data Viewer
Location:
37A4-37A5; 2-54 cM
Exon count:
2
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (18812648..18813941)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (18812648..18813941)

Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR43817 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene UDP-glycosyltransferase family 36 member F1 Neighboring gene UDP-glycosyltransferase family 36 member D1

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Exhaustive identification of conserved upstream open reading frames with potential translational regulatory functions from animal genomes. Takahashi H, et al. Sci Rep, 2020 Oct 1. PMID 33004976, Free PMC Article
  2. Comparative genomic analysis of novel conserved peptide upstream open reading frames in Drosophila melanogaster and other dipteran species. Hayden CA, et al. BMC Genomics, 2008 Feb 1. PMID 18237443, Free PMC Article
  3. High-fidelity promoter profiling reveals widespread alternative promoter usage and transposon-driven developmental gene expression. Batut P, et al. Genome Res, 2013 Jan. PMID 22936248, Free PMC Article
  4. Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species. Sanfilippo P, et al. Genome Biol, 2017 Nov 30. PMID 29191225, Free PMC Article
  5. Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster. Liu X, et al. RNA, 2017 Dec. PMID 28851752, Free PMC Article

See all (17) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

General protein information

Go to the top of the page Help
Preferred Names
uncharacterized protein
Names
CG42305-PA
CG42305-PB
CG42305-PC
CPuORF of FBgn0040993

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033779.5 Reference assembly

    Range
    18812648..18813941
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001299135.1 → NP_001286064.1  uncharacterized protein Dmel_CG42305, isoform C [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001286064.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    B7YZX3

  2. NM_001144366.2 → NP_001137838.1  uncharacterized protein Dmel_CG42305, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001137838.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    B7YZX3

  3. NM_001144365.2 → NP_001137837.1  uncharacterized protein Dmel_CG42305, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001137837.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    B7YZX3
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
B7YZX3 B7YZX3

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials