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1700110I01Rik RIKEN cDNA 1700110I01 gene [ Mus musculus (house mouse) ]

Gene ID: 73549, updated on 17-Aug-2024

Summary

Official Symbol
1700110I01Rikprovided by MGI
Official Full Name
RIKEN cDNA 1700110I01 geneprovided by MGI
Primary source
MGI:MGI:1920799
See related
Ensembl:ENSMUSG00000079407 AllianceGenome:MGI:1920799
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm2938; 100040740; 1700016F01Rik
Expression
Biased expression in testis adult (RPKM 34.8) and placenta adult (RPKM 11.0) See more
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Genomic context

See 1700110I01Rik in Genome Data Viewer
Location:
14 A2; 14 1.73 cM
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 14 NC_000080.7 (19163942..19207371, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 14 NC_000080.6 (3262402..3305831)

Chromosome 14 - NC_000080.7Genomic Context describing neighboring genes Neighboring gene predicted gene 10413 Neighboring gene predicted gene 2956 Neighboring gene predicted gene, 46491 Neighboring gene RIKEN cDNA D830030K20 gene Neighboring gene ribosomal protein L3 pseudogene Neighboring gene ubiquitin specific peptidase 7 pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_038059.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC131650, AC186757
    Related
    ENSMUST00000112812.8

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000080.7 Reference GRCm39 C57BL/6J

    Range
    19163942..19207371 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)