U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

ydiB quinate/shikimate dehydrogenase [ Shigella dysenteriae ]

Gene ID: 75171755, updated on 3-Dec-2024

Summary

Go to the top of the page Help
Gene symbol
ydiB
Gene description
quinate/shikimate dehydrogenase
Locus tag
HUZ68_RS12175
Gene type
protein coding
Organism
Shigella dysenteriae (strain: SWHEFF_49)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Shigella
Old locus tag
HUZ68_12045
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help

NZ_CP055055.1Genomic Context describing neighboring genes Neighboring gene MFS transporter Neighboring gene MFS transporter Neighboring gene type I 3-dehydroquinate dehydratase Neighboring gene acyl CoA:acetate/3-ketoacid CoA transferase

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NZ_CP055055.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Shikimate dehydrogenase structure reveals novel fold. Vogan E. Structure, 2003 Aug. PMID 12906820
  2. Site-directed mutagenesis of the active site region in the quinate/shikimate 5-dehydrogenase YdiB of Escherichia coli. Lindner HA, et al. J Biol Chem, 2005 Feb 25. PMID 15596430
  3. Transcriptome analysis of a shikimic acid producing strain of Escherichia coli W3110 grown under carbon- and phosphate-limited conditions. Johansson L, et al. J Biotechnol, 2006 Dec 1. PMID 16828913
  4. High-resolution genomic surveillance elucidates a multilayered hierarchical transfer of resistance between WWTP- and human/animal-associated bacteria. Che Y, et al. Microbiome, 2022 Jan 25. PMID 35078531, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

General protein information

Go to the top of the page Help
Preferred Names
quinate/shikimate dehydrogenase
WP_000383469.1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_CP055055.1 Reference assembly

    Range
    2551941..2552807
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_000383469.1 MULTISPECIES: quinate/shikimate dehydrogenase [Enterobacteriaceae]

    See identical proteins and their annotated locations for WP_000383469.1

    UniProtKB/Swiss-Prot
    A8A0N8, B1IQ64, B1XG00, B2U2J6, B7MVG8, C4ZYF4, P0A6D5, P0A6D6, P0C2L9, P28244, P77647
    UniProtKB/TrEMBL
    A0A0J3Y4Z4, A0A140NB88, A0A1X3I771, A0A1X3IYV9, A0A1X3JGJ9, A0A236RTQ7, A0A2A2XRE8, A0A380AVW8, A0A3P6LTF5, A0A7I0KPD0, A0A7W4KJ91, A0A7Z8BGW3, A0A829L0E4, A0AAD2NT51, A0AAN3MDY4, D3GUI3, F4SYR7, I6E8C0, J7QES8, S1PYY0, W1XDR4
    Conserved Domains (1) summary
    PRK12749
    Location:1 → 288
    PRK12749; quinate/shikimate dehydrogenase; Reviewed
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases