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ddlB D-alanine--D-alanine ligase [ Shigella boydii ]

Gene ID: 75202091, updated on 3-Dec-2024

Summary

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Gene symbol
ddlB
Gene description
D-alanine--D-alanine ligase
Locus tag
CEH00_RS00730
Gene type
protein coding
Organism
Shigella boydii (strain: ESBL-W3-2, nat-host: Homo sapiens)
Lineage
Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Shigella
Old locus tag
CEH00_00730
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Genomic context

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NZ_NIYS01000002.1Genomic Context describing neighboring genes Neighboring gene cell division protein FtsZ Neighboring gene cell division protein FtsA Neighboring gene cell division protein FtsQ Neighboring gene UDP-N-acetylmuramate--L-alanine ligase Neighboring gene undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase Neighboring gene cell division protein FtsW Neighboring gene UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_NIYS01000002.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. D-alanine:D-alanine ligase: phosphonate and phosphinate intermediates with wild type and the Y216F mutant. Fan C, et al. Biochemistry, 1997 Mar 4. PMID 9054558
  2. Regulation of expression of the ftsA cell division gene by sequences in upstream genes. Dewar SJ, et al. J Bacteriol, 1990 Nov. PMID 2228979, Free PMC Article
  3. D-alanine: D-alanine ligase of Escherichia coli. Expression, purification and inhibitory studies on the cloned enzyme. al-Bar OA, et al. Biochem J, 1992 Mar 15. PMID 1554356, Free PMC Article
  4. Vancomycin resistance: structure of D-alanine:D-alanine ligase at 2.3 A resolution. Fan C, et al. Science, 1994 Oct 21. PMID 7939684

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
D-alanine--D-alanine ligase
WP_000130056.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_NIYS01000002.1 Reference assembly

    Range
    111893..112813 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_000130056.1 MULTISPECIES: D-alanine--D-alanine ligase [Enterobacteriaceae]

    See identical proteins and their annotated locations for WP_000130056.1

    UniProtKB/Swiss-Prot
    P07862
    UniProtKB/TrEMBL
    A0A0I2EZP5, A0A0J3ZAN0, A0A1X3ICT9, A0A1X3JNE4, A0A2A2XGB1, A0A4P8CAE2, A0A6H2GJ68, A0A7M3S256, A0A7U9LNQ6, A0A7Z1EKU8, A0A829L097, A0A836ZDS1, A0A979GCK8, A0A9P2I6G9, A0A9Q5UBN5, A0A9Q6UW99, A0AAD2NRK0, A0AAD2V9B4, A0AAD2YVF6, A0AAD2ZC51, A0AAN1S1R6, A0AAN3W855, A0AAN4ADV6, A0AAN4NZ59, A0AAP9MMK8, B7N7W5, D3H473, E0IYT7, I6D6Q9, J7QWX0, Q3Z5R7, W1X7C1
    Conserved Domains (1) summary
    PRK01372
    Location:1 → 306
    ddl; D-alanine--D-alanine ligase; Reviewed
Nucleotide Protein
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