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ariR biofilm/acid-resistance regulator AriR [ Shigella boydii ]

Gene ID: 75203729, updated on 3-Dec-2024

Summary

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Gene symbol
ariR
Gene description
biofilm/acid-resistance regulator AriR
Locus tag
CEH00_RS09620
Gene type
protein coding
RefSeq status
PIPELINE
Organism
Shigella boydii (strain: ESBL-W3-2, nat-host: Homo sapiens)
Lineage
Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Shigella
Also known as
ymgB
Old locus tag
CEH00_09670
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Genomic context

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NZ_NIYS01000066.1Genomic Context describing neighboring genes Neighboring gene two-component-system connector protein YmgA Neighboring gene regulatory protein YcgZ Neighboring gene protein YmgC Neighboring gene cyclic diguanylate phosphodiesterase

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_NIYS01000066.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Insights on Escherichia coli biofilm formation and inhibition from whole-transcriptome profiling. Wood TK. Environ Microbiol, 2009 Jan. PMID 19125816, Free PMC Article
  2. 5-Fluorouracil reduces biofilm formation in Escherichia coli K-12 through global regulator AriR as an antivirulence compound. Attila C, et al. Appl Microbiol Biotechnol, 2009 Mar. PMID 19172264
  3. Structure and function of the Escherichia coli protein YmgB: a protein critical for biofilm formation and acid-resistance. Lee J, et al. J Mol Biol, 2007 Oct 12. PMID 17765265, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
biofilm/acid-resistance regulator AriR

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_NIYS01000066.1 Reference assembly

    Range
    117470..117736
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_000888772.1 MULTISPECIES: biofilm/acid-resistance regulator AriR [Enterobacteriaceae]

    See identical proteins and their annotated locations for WP_000888772.1

    Status: PIPELINE

    UniProtKB/Swiss-Prot
    A7ZKT2, A7ZZ97, B1IUC4, B1XA53, P75993, Q2MBG9
    UniProtKB/TrEMBL
    A0A0E0Y1X9, A0A140NCL1, A0A1X3J1A6, A0A1X3JJ31, A0A2A2XNR8, A0A2Y4Y555, A0A398TV75, A0A4P8C1J7, A0A6H2GFB6, A0A7U9J047, A0A836NF73, A0A8E0FKL2, A0A979GDY8, A0A9P2MJS5, A0A9P2MWE9, A0A9Q6Y0W7, A0AA35AI85, A0AAD2UEF4, A0AAD2VGK1, A0AAD2ZAR0, A0AAN1VJX0, A0AAN3SEI1, A0AAN3UZN8, A0AAN3ZED9, A0AAP9MJP9, B7LGS1, E0IV97, J7Q740
    Conserved Domains (1) summary
    pfam10798
    Location:29 → 87
    YmgB; Biofilm development protein YmgB/AriR
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
AAC74250.1

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