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ygdR lipoprotein YgdR [ Shigella boydii ]

Gene ID: 75203775, updated on 3-Dec-2024

Summary

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Gene symbol
ygdR
Gene description
lipoprotein YgdR
Locus tag
CEH00_RS09870
Gene type
protein coding
Organism
Shigella boydii (strain: ESBL-W3-2, nat-host: Homo sapiens)
Lineage
Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Shigella
Old locus tag
CEH00_09930
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Genomic context

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NZ_NIYS01000069.1Genomic Context describing neighboring genes Neighboring gene bifunctional acyl-ACP--phospholipid O-acyltransferase/long-chain-fatty-acid--ACP ligase Neighboring gene lysophospholipid transporter LplT Neighboring gene NADP(H)-dependent aldo-keto reductase Neighboring gene TerC family protein Neighboring gene DNA mismatch repair endonuclease MutH

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_NIYS01000069.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
lipoprotein YgdR

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_NIYS01000069.1 Reference assembly

    Range
    16428..16646 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_000758655.1 MULTISPECIES: lipoprotein YgdR [Pseudomonadota]

    See identical proteins and their annotated locations for WP_000758655.1

    UniProtKB/Swiss-Prot
    P65294, P65295, P65296, P65297, Q2MA04, Q46932
    UniProtKB/TrEMBL
    A0A090NMY7, A0A0E0XWG8, A0A0E2L1N2, A0A0H3ELN8, A0A0H3MU01, A0A0H3PSU2, A0A0H9DRJ0, A0A0J3YQM0, A0A0X8S2S9, A0A140N5Q4, A0A192CBJ0, A0A1Q8M480, A0A1Q8N8W9, A0A1W2N1A0, A0A1X3I1W7, A0A1X3IWG7, A0A1X3JD69, A0A2A2XED2, A0A2K9PI24, A0A2S7SDD3, A0A3Q8D8R7, A0A454A794, A0A4P8BYE7, A0A4V1CTG7, A0A6N3QT03, A0A6N3R0H6, A0A7I6H2R6, A0A7U9LGQ4, A0A7U9NYL2, A0A7W4KKI0, A0A7Z1EGF3, A0A822PFP2, A0A828U4E2, A0A829LFN2, A0A836NBD8, A0A8E0FMT2, A0A8H9NVH1, A0A979H3E4, A0A9P2IA56, A0A9P2LRM0, A0A9Q6V1Z7, A0AA35ALZ6, A0AA36P9C4, A0AAD2NUB4, A0AAD2UAG4, A0AAD2V5K1, A0AAD2ZC08, A0AAN1E287, A0AAN1S7T1, A0AAN3MCJ0, A0AAN3V5P7, A0AAN4SWT7, A0AAV3H6F4, A0AAV3I2D2, A7ZQT9, B1LR31, B2TYQ8, B7LF10, B7LNI8, B7MLH9, B7MYY7, B7N765, B7UHQ1, C3SWG7, D2AIR2, D3GST0, E0IWI8, E2X7K3, F4T2G6, F5NZ72, I6CHE5, I6DUA1, Q1R7H8, Q31XF4, Q32C88, Q3YY27, S1PP76, W1EVG7, W1XIB1
    Conserved Domains (1) summary
    NF033216
    Location:2 → 72
    lipo_YgdI_YgdR; YgdI/YgdR family lipoprotein
Nucleotide Protein
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