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4930566D17Rik RIKEN cDNA 4930566D17 gene [ Mus musculus (house mouse) ]

Gene ID: 75900, updated on 17-Aug-2024

Summary

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Official Symbol
4930566D17Rikprovided by MGI
Official Full Name
RIKEN cDNA 4930566D17 geneprovided by MGI
Primary source
MGI:MGI:1923150
See related
AllianceGenome:MGI:1923150
Gene type
ncRNA
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
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Genomic context

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See 4930566D17Rik in Genome Data Viewer
Location:
8; 8 E2
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 8 NC_000074.7 (126249071..126262565)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 8 NC_000074.6 (125522332..125535826)

Chromosome 8 - NC_000074.7Genomic Context describing neighboring genes Neighboring gene CapStarr-seq enhancer MGSCv37_chr8:127591083-127591270 Neighboring gene CapStarr-seq enhancer MGSCv37_chr8:127591569-127591752 Neighboring gene VISTA enhancer mm1749 Neighboring gene disrupted in schizophrenia 1 Neighboring gene VISTA enhancer mm149 Neighboring gene CapStarr-seq enhancer MGSCv37_chr8:127817421-127817530 Neighboring gene STARR-seq mESC enhancer starr_23015 Neighboring gene STARR-seq mESC enhancer starr_23016 Neighboring gene STARR-seq mESC enhancer starr_23018 Neighboring gene STARR-positive B cell enhancer mm9_chr8:127915206-127915507 Neighboring gene STARR-seq mESC enhancer starr_23020 Neighboring gene predicted gene, 30713 Neighboring gene signal-induced proliferation-associated 1 like 2 Neighboring gene STARR-seq mESC enhancer starr_23022 Neighboring gene CapStarr-seq enhancer MGSCv37_chr8:128084754-128084863 Neighboring gene RIKEN cDNA 4930567H12 gene Neighboring gene predicted gene, 51602

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
  2. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
  3. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article
  4. Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes. Carninci P, et al. Genome Res, 2000 Oct. PMID 11042159, Free PMC Article
  5. Functional annotation of a full-length mouse cDNA collection. Kawai J, et al. Nature, 2001 Feb 8. PMID 11217851

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000074.7 Reference GRCm39 C57BL/6J

    Range
    126249071..126262565
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_003947610.1 RNA Sequence

  2. XR_003947612.1 RNA Sequence

  3. XR_003947611.1 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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