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Pla2g10os phospholipase A2, group X, opposite strand [ Mus musculus (house mouse) ]

Gene ID: 76684, updated on 22-Oct-2024

Summary

Official Symbol
Pla2g10osprovided by MGI
Official Full Name
phospholipase A2, group X, opposite strandprovided by MGI
Primary source
MGI:MGI:1923934
See related
Ensembl:ENSMUSG00000086550 AllianceGenome:MGI:1923934
Gene type
ncRNA
RefSeq status
PREDICTED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
1810007I06Rik
Expression
Biased expression in colon adult (RPKM 9.3), stomach adult (RPKM 8.9) and 4 other tissues See more
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Genomic context

See Pla2g10os in Genome Data Viewer
Location:
16 A1; 16 9.52 cM
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 16 NC_000082.7 (13547700..13557335)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 16 NC_000082.6 (13729836..13739471)

Chromosome 16 - NC_000082.7Genomic Context describing neighboring genes Neighboring gene poly(A)-specific ribonuclease (deadenylation nuclease) Neighboring gene non-histone chromosomal protein HMG-14 pseudogene Neighboring gene periphilin 1, pseudogene 1 Neighboring gene bifunctional apoptosis regulator Neighboring gene phospholipase A2, group X Neighboring gene STARR-seq mESC enhancer starr_40155 Neighboring gene RIKEN cDNA A930007A09 gene Neighboring gene STARR-seq mESC enhancer starr_40157 Neighboring gene STARR-seq mESC enhancer starr_40159 Neighboring gene elongin-B pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Other Names

  • Pla2g10 opposite strand transcript

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_040574.1 RNA Sequence

    Status: PREDICTED

    Source sequence(s)
    AK007362
    Related
    ENSMUST00000141172.4

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000082.7 Reference GRCm39 C57BL/6J

    Range
    13547700..13557335
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)