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VAPA VAMP associated protein A [ Gallus gallus (chicken) ]

Gene ID: 768928, updated on 17-Aug-2024

Summary

Symbol
VAPAprovided by CGNC
Full Name
VAMP associated protein Aprovided by CGNC
Primary source
CGNC:54859
See related
Ensembl:ENSGALG00010001749
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
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Genomic context

See VAPA in Genome Data Viewer
Location:
chromosome: 2
Exon count:
6
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 2 NC_052533.1 (97965836..97997739, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 2 NC_052574.1 (98024522..98056423, complement)

Chromosome 2 - NC_052533.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101751084 Neighboring gene myelin oligodendrocyte glycoprotein Neighboring gene translation initiation factor IF-2-like Neighboring gene APC down-regulated 1 Neighboring gene uncharacterized LOC101751230 Neighboring gene RAB31, member RAS oncogene family

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables FFAT motif binding IEA
Inferred from Electronic Annotation
more info
PubMed 
Process Evidence Code Pubs
involved_in neuron projection development IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
PubMed 

General protein information

Preferred Names
vesicle-associated membrane protein-associated protein A
Names
VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001080869.3NP_001074338.1  vesicle-associated membrane protein-associated protein A isoform 2

    See identical proteins and their annotated locations for NP_001074338.1

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000043
    UniProtKB/TrEMBL
    Q5F419
    Conserved Domains (1) summary
    pfam00635
    Location:13117
    Motile_Sperm; MSP (Major sperm protein) domain
  2. NM_001389455.2NP_001376384.1  vesicle-associated membrane protein-associated protein A isoform 1

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000043
    UniProtKB/TrEMBL
    A0A8V0X6S4
    Related
    ENSGALP00010002299.1, ENSGALT00010004000.1
    Conserved Domains (1) summary
    pfam00635
    Location:13117
    Motile_Sperm; MSP (Major sperm protein) domain

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052533.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    97965836..97997739 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052574.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    98024522..98056423 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)