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LOC769660 zinc finger protein 184-like [ Gallus gallus (chicken) ]

Gene ID: 769660, updated on 17-Aug-2024

Summary

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Symbol
LOC769660provided by CGNC
Full Name
zinc finger protein 184-likeprovided by CGNC
Primary source
CGNC:55430
See related
Ensembl:ENSGALG00010001258
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
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Genomic context

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See LOC769660 in Genome Data Viewer
Location:
chromosome: 33
Exon count:
8
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 33 NC_052564.1 (81318..95857)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 33 NC_052605.1 (35644..50187)

Chromosome 33 - NC_052564.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121108051 Neighboring gene uncharacterized LOC107049262 Neighboring gene zinc finger protein 7 like Neighboring gene uncharacterized LOC107049242

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger protein 501

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052564.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    81318..95857
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040654602.2 → XP_040510536.1  zinc finger protein 501 isoform X1

    Conserved Domains (4) summary
    PHA00733
    Location:476 → 526
    PHA00733; hypothetical protein
    smart00349
    Location:11 → 72
    KRAB; krueppel associated box
    COG5048
    Location:242 → 481
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:285 → 305
    ZF_C2H2; C2H2 Zn finger [structural motif]

  2. XM_040654604.2 → XP_040510538.1  zinc finger protein 501 isoform X3

    Conserved Domains (4) summary
    PHA00733
    Location:475 → 525
    PHA00733; hypothetical protein
    smart00349
    Location:11 → 72
    KRAB; krueppel associated box
    COG5048
    Location:241 → 480
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:284 → 304
    ZF_C2H2; C2H2 Zn finger [structural motif]

  3. XM_046904916.1 → XP_046760872.1  zinc finger protein 501 isoform X2

    UniProtKB/TrEMBL
    A0A8V0XAB3
    Related
    ENSGALP00010001454.1, ENSGALT00010002908.1

RNA

  1. XR_003072622.3 RNA Sequence

  2. XR_005842339.2 RNA Sequence

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052605.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    35644..50187
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040693569.2 → XP_040549503.1  zinc finger protein 501 isoform X1

    Conserved Domains (4) summary
    PHA00733
    Location:476 → 526
    PHA00733; hypothetical protein
    smart00349
    Location:11 → 72
    KRAB; krueppel associated box
    COG5048
    Location:242 → 481
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:285 → 305
    ZF_C2H2; C2H2 Zn finger [structural motif]

  2. XM_040693570.2 → XP_040549504.1  zinc finger protein 501 isoform X3

    Conserved Domains (4) summary
    PHA00733
    Location:475 → 525
    PHA00733; hypothetical protein
    smart00349
    Location:11 → 72
    KRAB; krueppel associated box
    COG5048
    Location:241 → 480
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:284 → 304
    ZF_C2H2; C2H2 Zn finger [structural motif]

  3. XM_046934144.1 → XP_046790100.1  zinc finger protein 501 isoform X2

  4. XM_046934143.1 → XP_046790099.1  zinc finger protein 501 isoform X2

RNA

  1. XR_005856564.2 RNA Sequence

  2. XR_005856563.2 RNA Sequence

Nucleotide Protein
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