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LRMDA leucine rich melanocyte differentiation associated [ Gallus gallus (chicken) ]

Gene ID: 770056, updated on 17-Aug-2024

Summary

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Official Symbol
LRMDAprovided by CGNC
Official Full Name
leucine rich melanocyte differentiation associatedprovided by CGNC
Primary source
CGNC:3706
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as
C10ORF11; C6H10orf11
Orthologs
human mouse all
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Genomic context

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See LRMDA in Genome Data Viewer
Location:
chromosome: 6
Exon count:
8
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 6 NC_052537.1 (14688820..15323378, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 6 NC_052578.1 (14674787..15309390, complement)

Chromosome 6 - NC_052537.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112532710 Neighboring gene potassium calcium-activated channel subfamily M alpha 1 Neighboring gene uncharacterized LOC107053653 Neighboring gene uncharacterized LOC124418046 Neighboring gene uncharacterized LOC124418048 Neighboring gene uncharacterized LOC124418047 Neighboring gene zinc finger protein 503

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in melanocyte differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
leucine-rich repeat-containing protein C10orf11 homolog; leucine-rich melanocyte differentiation-associated protein
Names
chromosome 6 C10orf11 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052537.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    14688820..15323378 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040702701.2 → XP_040558635.1  leucine-rich melanocyte differentiation-associated protein isoform X2

    Conserved Domains (1) summary
    sd00031
    Location:34 → 57
    LRR_1; leucine-rich repeat [structural motif]

  2. XM_040702700.2 → XP_040558634.1  leucine-rich melanocyte differentiation-associated protein isoform X1

    Conserved Domains (1) summary
    sd00031
    Location:33 → 56
    LRR_1; leucine-rich repeat [structural motif]

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052578.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    14674787..15309390 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040674508.2 → XP_040530442.1  leucine-rich melanocyte differentiation-associated protein isoform X2

    Conserved Domains (1) summary
    sd00031
    Location:34 → 57
    LRR_1; leucine-rich repeat [structural motif]

  2. XM_040674507.2 → XP_040530441.1  leucine-rich melanocyte differentiation-associated protein isoform X1

    Conserved Domains (1) summary
    sd00031
    Location:33 → 56
    LRR_1; leucine-rich repeat [structural motif]
Nucleotide Protein
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