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AGBL5 ATP/GTP binding protein like 5 [ Gallus gallus (chicken) ]

Gene ID: 770678, updated on 17-Aug-2024

Summary

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Symbol
AGBL5provided by CGNC
Full Name
ATP/GTP binding protein like 5provided by CGNC
Primary source
CGNC:12374
See related
Ensembl:ENSGALG00010009089
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See AGBL5 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
13
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 3 NC_052534.1 (104293590..104302055)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 3 NC_052575.1 (104054204..104062693)

Chromosome 3 - NC_052534.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 214 Neighboring gene transfer RNA alanine (anticodon AGC) Neighboring gene oligosaccharyltransferase complex subunit 4, non-catalytic Neighboring gene elastin microfibril interfacer 1 Neighboring gene protein kinase, cAMP-dependent, catalytic, alpha Neighboring gene ketohexokinase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metallocarboxypeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein deglutamylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cytosolic carboxypeptidase-like protein 5
XP_015140493.2
XP_015140495.2
XP_015140497.2
XP_025004877.2
XP_025004878.2
XP_040524194.1
XP_040524195.1
XP_040524196.1
XP_040524197.1
XP_040524198.1
XP_040524199.1
XP_040553966.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052534.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    104293590..104302055
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015285007.4 → XP_015140493.2  cytosolic carboxypeptidase-like protein 5 isoform X1

    UniProtKB/TrEMBL
    A0A8V0Y4D6
    Related
    ENSGALP00010012355.1, ENSGALT00010021661.1
    Conserved Domains (2) summary
    PHA03307
    Location:576 → 746
    PHA03307; transcriptional regulator ICP4; Provisional
    cd06236
    Location:176 → 573
    M14_AGBL5_like; Peptidase M14-like domain of ATP/GTP binding protein (AGBL)-5 and related proteins

  2. XM_015285009.4 → XP_015140495.2  cytosolic carboxypeptidase-like protein 5 isoform X2

    UniProtKB/TrEMBL
    A0A8V0XVQ7
    Related
    ENSGALP00010012342.1, ENSGALT00010021647.1
    Conserved Domains (2) summary
    PHA03307
    Location:576 → 746
    PHA03307; transcriptional regulator ICP4; Provisional
    cd06236
    Location:176 → 573
    M14_AGBL5_like; Peptidase M14-like domain of ATP/GTP binding protein (AGBL)-5 and related proteins

  3. XM_015285011.4 → XP_015140497.2  cytosolic carboxypeptidase-like protein 5 isoform X3

    Conserved Domains (1) summary
    cd06236
    Location:64 → 460
    M14_AGBL5_like; Peptidase M14-like domain of ATP/GTP binding protein (AGBL)-5 and related proteins

  4. XM_040698032.2 → XP_040553966.1  cytosolic carboxypeptidase-like protein 5 isoform X4

    Conserved Domains (2) summary
    PHA03247
    Location:517 → 760
    PHA03247; large tegument protein UL36; Provisional
    cd06236
    Location:176 → 510
    M14_AGBL5_like; Peptidase M14-like domain of ATP/GTP binding protein (AGBL)-5 and related proteins

  5. XM_025149109.2 → XP_025004877.2  cytosolic carboxypeptidase-like protein 5 isoform X5

    Conserved Domains (1) summary
    cd06236
    Location:1 → 365
    M14_AGBL5_like; Peptidase M14-like domain of ATP/GTP binding protein (AGBL)-5 and related proteins

  6. XM_025149110.3 → XP_025004878.2  cytosolic carboxypeptidase-like protein 5 isoform X5

    Conserved Domains (1) summary
    cd06236
    Location:1 → 365
    M14_AGBL5_like; Peptidase M14-like domain of ATP/GTP binding protein (AGBL)-5 and related proteins

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052575.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    104054204..104062693
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040668260.2 → XP_040524194.1  cytosolic carboxypeptidase-like protein 5 isoform X1

    Conserved Domains (2) summary
    PHA03307
    Location:576 → 746
    PHA03307; transcriptional regulator ICP4; Provisional
    cd06236
    Location:176 → 573
    M14_AGBL5_like; Peptidase M14-like domain of ATP/GTP binding protein (AGBL)-5 and related proteins

  2. XM_040668261.2 → XP_040524195.1  cytosolic carboxypeptidase-like protein 5 isoform X2

    Conserved Domains (2) summary
    PHA03307
    Location:576 → 746
    PHA03307; transcriptional regulator ICP4; Provisional
    cd06236
    Location:176 → 573
    M14_AGBL5_like; Peptidase M14-like domain of ATP/GTP binding protein (AGBL)-5 and related proteins

  3. XM_040668262.2 → XP_040524196.1  cytosolic carboxypeptidase-like protein 5 isoform X3

    Conserved Domains (1) summary
    cd06236
    Location:64 → 460
    M14_AGBL5_like; Peptidase M14-like domain of ATP/GTP binding protein (AGBL)-5 and related proteins

  4. XM_040668263.2 → XP_040524197.1  cytosolic carboxypeptidase-like protein 5 isoform X4

    Conserved Domains (2) summary
    PHA03247
    Location:519 → 760
    PHA03247; large tegument protein UL36; Provisional
    cd06236
    Location:176 → 510
    M14_AGBL5_like; Peptidase M14-like domain of ATP/GTP binding protein (AGBL)-5 and related proteins

  5. XM_040668264.2 → XP_040524198.1  cytosolic carboxypeptidase-like protein 5 isoform X5

    Conserved Domains (1) summary
    cd06236
    Location:1 → 365
    M14_AGBL5_like; Peptidase M14-like domain of ATP/GTP binding protein (AGBL)-5 and related proteins

  6. XM_040668265.2 → XP_040524199.1  cytosolic carboxypeptidase-like protein 5 isoform X5

    Conserved Domains (1) summary
    cd06236
    Location:1 → 365
    M14_AGBL5_like; Peptidase M14-like domain of ATP/GTP binding protein (AGBL)-5 and related proteins
Nucleotide Protein
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