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C7M33_RS01595 polysaccharide deacetylase family protein [ Lactiplantibacillus plantarum ]

Gene ID: 77215766, updated on 17-Oct-2024

Summary

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Gene symbol
C7M33_RS01595
Gene description
polysaccharide deacetylase family protein
Locus tag
C7M33_RS01595
Gene type
protein coding
Organism
Lactiplantibacillus plantarum (strain: SRCM100442)
Lineage
Bacteria; Bacillota; Bacilli; Lactobacillales; Lactobacillaceae; Lactiplantibacillus
Old locus tag
C7M33_00319
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Genomic context

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NZ_CP028221.1Genomic Context describing neighboring genes Neighboring gene ABC transporter ATP-binding protein Neighboring gene ABC transporter ATP-binding protein Neighboring gene YxeA family protein Neighboring gene tRNA-Glu Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_CP028221.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative Genomic Analysis of Lactobacillus plantarum GB-LP1 Isolated from Traditional Korean Fermented Food. Yu J, et al. J Microbiol Biotechnol, 2017 Aug 28. PMID 28621109
  2. Carbohydrate esterase family 4 enzymes: substrate specificity. Caufrier F, et al. Carbohydr Res, 2003 Mar 28. PMID 12644381

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
polysaccharide deacetylase family protein
WP_003644667.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_CP028221.1 Reference assembly

    Range
    304786..305637
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_003644667.1 MULTISPECIES: polysaccharide deacetylase family protein [Lactiplantibacillus]

    See identical proteins and their annotated locations for WP_003644667.1

    UniProtKB/TrEMBL
    A0A165IED6, A0A837NM55, F9UQT8
    Conserved Domains (1) summary
    cd10918
    Location:124 → 266
    CE4_NodB_like_5s_6s; Putative catalytic NodB homology domain of PgaB, IcaB, and similar proteins which consist of a deformed (beta/alpha)8 barrel fold with 5- or 6-strands
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases