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PTPRQ protein tyrosine phosphatase, receptor type Q [ Gallus gallus (chicken) ]

Gene ID: 772163, updated on 17-Aug-2024

Summary

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Official Symbol
PTPRQprovided by CGNC
Official Full Name
protein tyrosine phosphatase, receptor type Qprovided by CGNC
Primary source
CGNC:29677
See related
Ensembl:ENSGALG00010012230
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See PTPRQ in Genome Data Viewer
Location:
chromosome: 1
Exon count:
64
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 1 NC_052532.1 (39954962..40078678)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 1 NC_052573.1 (40298318..40422000)

Chromosome 1 - NC_052532.1Genomic Context describing neighboring genes Neighboring gene ribosomal protein S16 Neighboring gene otogelin-like Neighboring gene uncharacterized LOC121109501 Neighboring gene uncharacterized LOC121109290 Neighboring gene myogenic factor 6 Neighboring gene myogenic factor 5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein tyrosine phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphatidylinositol phosphatase PTPRQ
XP_040515955.1
XP_040515956.1
XP_040515957.1
XP_040515958.1
XP_040515959.1
XP_040515960.1
XP_040523437.1
XP_040523444.1
XP_040523454.1
XP_040523456.1
XP_040523460.1
XP_040523463.1
XP_040523471.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052532.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    39954962..40078678
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040667503.2 → XP_040523437.1  phosphatidylinositol phosphatase PTPRQ isoform X2

    UniProtKB/TrEMBL
    A0A8V0Y8L5
    Related
    ENSGALP00010017033.1, ENSGALT00010029334.1
    Conserved Domains (5) summary
    smart00034
    Location:195 → 325
    CLECT; C-type lectin (CTL) or carbohydrate-recognition domain (CRD)
    smart00060
    Location:869 → 939
    FN3; Fibronectin type 3 domain
    cd00063
    Location:1134 → 1228
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    cl06408
    Location:2851 → 3009
    UP_III_II; Uroplakin IIIb, IIIa and II
    cd14616
    Location:3133 → 3356
    R-PTPc-Q; catalytic domain of receptor-type tyrosine-protein phosphatase Q

  2. XM_040667510.2 → XP_040523444.1  phosphatidylinositol phosphatase PTPRQ isoform X3

    Conserved Domains (5) summary
    smart00034
    Location:195 → 325
    CLECT; C-type lectin (CTL) or carbohydrate-recognition domain (CRD)
    smart00060
    Location:869 → 939
    FN3; Fibronectin type 3 domain
    cd00063
    Location:1134 → 1228
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    cl06408
    Location:2851 → 3009
    UP_III_II; Uroplakin IIIb, IIIa and II
    cd14616
    Location:3124 → 3347
    R-PTPc-Q; catalytic domain of receptor-type tyrosine-protein phosphatase Q

  3. XM_040667520.2 → XP_040523454.1  phosphatidylinositol phosphatase PTPRQ isoform X4

    UniProtKB/TrEMBL
    A0A8V0YEU0
    Related
    ENSGALP00010017030.1, ENSGALT00010029329.1
    Conserved Domains (5) summary
    smart00034
    Location:195 → 325
    CLECT; C-type lectin (CTL) or carbohydrate-recognition domain (CRD)
    smart00060
    Location:869 → 939
    FN3; Fibronectin type 3 domain
    cd00063
    Location:1134 → 1228
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    cl06408
    Location:2851 → 3009
    UP_III_II; Uroplakin IIIb, IIIa and II
    cd14616
    Location:3118 → 3341
    R-PTPc-Q; catalytic domain of receptor-type tyrosine-protein phosphatase Q

  4. XM_040667522.2 → XP_040523456.1  phosphatidylinositol phosphatase PTPRQ isoform X5

    UniProtKB/TrEMBL
    A0A8V0Y8M5
    Related
    ENSGALP00010017044.1, ENSGALT00010029347.1
    Conserved Domains (5) summary
    smart00034
    Location:195 → 325
    CLECT; C-type lectin (CTL) or carbohydrate-recognition domain (CRD)
    smart00060
    Location:869 → 939
    FN3; Fibronectin type 3 domain
    cd00063
    Location:1134 → 1228
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    cl06408
    Location:2851 → 3009
    UP_III_II; Uroplakin IIIb, IIIa and II
    cd14616
    Location:3109 → 3332
    R-PTPc-Q; catalytic domain of receptor-type tyrosine-protein phosphatase Q

  5. XM_040667526.2 → XP_040523460.1  phosphatidylinositol phosphatase PTPRQ isoform X1

    Conserved Domains (5) summary
    smart00034
    Location:195 → 325
    CLECT; C-type lectin (CTL) or carbohydrate-recognition domain (CRD)
    smart00060
    Location:869 → 939
    FN3; Fibronectin type 3 domain
    cd00063
    Location:1047 → 1141
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    cl06408
    Location:2764 → 2922
    UP_III_II; Uroplakin IIIb, IIIa and II
    cd14616
    Location:3046 → 3269
    R-PTPc-Q; catalytic domain of receptor-type tyrosine-protein phosphatase Q

  6. XM_040667529.2 → XP_040523463.1  phosphatidylinositol phosphatase PTPRQ isoform X6

    Conserved Domains (4) summary
    smart00034
    Location:195 → 325
    CLECT; C-type lectin (CTL) or carbohydrate-recognition domain (CRD)
    smart00060
    Location:869 → 939
    FN3; Fibronectin type 3 domain
    cd00063
    Location:1134 → 1228
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    cl06408
    Location:2851 → 3000
    UP_III_II; Uroplakin IIIb, IIIa and II

  7. XM_040667537.1 → XP_040523471.1  phosphatidylinositol phosphatase PTPRQ isoform X7

    Conserved Domains (4) summary
    smart00060
    Location:251 → 321
    FN3; Fibronectin type 3 domain
    cd00063
    Location:516 → 610
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    cl06408
    Location:2233 → 2391
    UP_III_II; Uroplakin IIIb, IIIa and II
    cd14616
    Location:2515 → 2738
    R-PTPc-Q; catalytic domain of receptor-type tyrosine-protein phosphatase Q

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052573.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    40298318..40422000
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040660021.2 → XP_040515955.1  phosphatidylinositol phosphatase PTPRQ isoform X1

    Conserved Domains (5) summary
    smart00034
    Location:195 → 325
    CLECT; C-type lectin (CTL) or carbohydrate-recognition domain (CRD)
    smart00060
    Location:869 → 939
    FN3; Fibronectin type 3 domain
    cd00063
    Location:1047 → 1141
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    cl06408
    Location:2764 → 2922
    UP_III_II; Uroplakin IIIb, IIIa and II
    cd14616
    Location:3046 → 3269
    R-PTPc-Q; catalytic domain of receptor-type tyrosine-protein phosphatase Q

  2. XM_040660022.2 → XP_040515956.1  phosphatidylinositol phosphatase PTPRQ isoform X8

    Conserved Domains (5) summary
    smart00034
    Location:195 → 325
    CLECT; C-type lectin (CTL) or carbohydrate-recognition domain (CRD)
    smart00060
    Location:869 → 939
    FN3; Fibronectin type 3 domain
    cd00063
    Location:1047 → 1141
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    cl06408
    Location:2764 → 2922
    UP_III_II; Uroplakin IIIb, IIIa and II
    cd14616
    Location:3037 → 3260
    R-PTPc-Q; catalytic domain of receptor-type tyrosine-protein phosphatase Q

  3. XM_040660023.2 → XP_040515957.1  phosphatidylinositol phosphatase PTPRQ isoform X9

    Conserved Domains (5) summary
    smart00034
    Location:195 → 325
    CLECT; C-type lectin (CTL) or carbohydrate-recognition domain (CRD)
    smart00060
    Location:869 → 939
    FN3; Fibronectin type 3 domain
    cd00063
    Location:1047 → 1141
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    cl06408
    Location:2764 → 2922
    UP_III_II; Uroplakin IIIb, IIIa and II
    cd14616
    Location:3031 → 3254
    R-PTPc-Q; catalytic domain of receptor-type tyrosine-protein phosphatase Q

  4. XM_040660024.2 → XP_040515958.1  phosphatidylinositol phosphatase PTPRQ isoform X10

    Conserved Domains (5) summary
    smart00034
    Location:195 → 325
    CLECT; C-type lectin (CTL) or carbohydrate-recognition domain (CRD)
    smart00060
    Location:869 → 939
    FN3; Fibronectin type 3 domain
    cd00063
    Location:1047 → 1141
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    cl06408
    Location:2764 → 2922
    UP_III_II; Uroplakin IIIb, IIIa and II
    cd14616
    Location:3022 → 3245
    R-PTPc-Q; catalytic domain of receptor-type tyrosine-protein phosphatase Q

  5. XM_040660025.2 → XP_040515959.1  phosphatidylinositol phosphatase PTPRQ isoform X11

    Conserved Domains (4) summary
    smart00034
    Location:195 → 325
    CLECT; C-type lectin (CTL) or carbohydrate-recognition domain (CRD)
    smart00060
    Location:869 → 939
    FN3; Fibronectin type 3 domain
    cd00063
    Location:1047 → 1141
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    cl06408
    Location:2764 → 2913
    UP_III_II; Uroplakin IIIb, IIIa and II

  6. XM_040660026.1 → XP_040515960.1  phosphatidylinositol phosphatase PTPRQ isoform X12

    Conserved Domains (4) summary
    smart00060
    Location:251 → 321
    FN3; Fibronectin type 3 domain
    cd00063
    Location:429 → 523
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    cl06408
    Location:2146 → 2304
    UP_III_II; Uroplakin IIIb, IIIa and II
    cd14616
    Location:2428 → 2651
    R-PTPc-Q; catalytic domain of receptor-type tyrosine-protein phosphatase Q
Nucleotide Protein
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