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hfq RNA chaperone Hfq [ Pseudomonas paraeruginosa ]

Gene ID: 77223493, updated on 12-Dec-2024

Summary

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Gene symbol
hfq
Gene description
RNA chaperone Hfq
Locus tag
B7D75_RS25700
Gene type
protein coding
Organism
Pseudomonas paraeruginosa (strain: Cr1)
Lineage
Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
Old locus tag
B7D75_25715
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Genomic context

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NZ_CP020560.1Genomic Context describing neighboring genes Neighboring gene protease modulator HflC Neighboring gene FtsH protease activity modulator HflK Neighboring gene ribosome rescue GTPase HflX Neighboring gene tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA Neighboring gene DNA mismatch repair endonuclease MutL Neighboring gene N-acetylmuramoyl-L-alanine amidase AmiB

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_CP020560.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The RNA chaperone Hfq impacts growth, metabolism and production of virulence factors in Yersinia enterocolitica. Kakoschke T, et al. PLoS One, 2014. PMID 24454955, Free PMC Article
  2. Hfq regulates anti-oxidative ability in Vibrio parahaemolyticus. Su Z, et al. J Gen Appl Microbiol, 2010 Jun. PMID 20647674
  3. Structure of Pseudomonas aeruginosa Hfq protein. Nikulin A, et al. Acta Crystallogr D Biol Crystallogr, 2005 Feb. PMID 15681864

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
RNA chaperone Hfq

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_CP020560.1 Reference assembly

    Range
    5414311..5414559 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_003095657.1 MULTISPECIES: RNA chaperone Hfq [Gammaproteobacteria]

    See identical proteins and their annotated locations for WP_003095657.1

    UniProtKB/Swiss-Prot
    A6VD57, B7V207, Q02F74, Q9HUM0
    UniProtKB/TrEMBL
    A0A127N128, A0A1A5D9R7, A0A1H0N4R9, A0A1S1C3K7, A0A1S1GJZ6, A0A239EW22, A0A2V3F1A3, A0A448BTK5, A0A6N0KXM8, A0A9Q9JTZ1
    Conserved Domains (1) summary
    PRK00395
    Location:1 → 78
    hfq; RNA-binding protein Hfq; Provisional
Nucleotide Protein
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