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OCV44_RS17470 RNA-binding protein [ Vibrio tasmaniensis ]

Gene ID: 77318286, updated on 14-Oct-2024

Summary

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Gene symbol
OCV44_RS17470
Gene description
RNA-binding protein
Locus tag
OCV44_RS17470
Gene type
protein coding
Organism
Vibrio tasmaniensis (strain: LMG 20012, culture-collection: BCCM/LMG:20012, type-material: type strain of Vibrio tasmaniensis)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio
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Genomic context

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Location:
chromosome: 2

2 - NZ_AP025511.1Genomic Context describing neighboring genes Neighboring gene MalY/PatB family protein Neighboring gene ribosome recycling factor family protein Neighboring gene DNA polymerase III subunit epsilon Neighboring gene DUF3833 domain-containing protein Neighboring gene chalcone isomerase family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_AP025511.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The RNA recognition motif, a plastic RNA-binding platform to regulate post-transcriptional gene expression. Maris C, et al. FEBS J, 2005 May. PMID 15853797
  2. Structural insight into RNA recognition motifs: versatile molecular Lego building blocks for biological systems. Muto Y, et al. Wiley Interdiscip Rev RNA, 2012 Mar-Apr. PMID 22278943
  3. RNA recognition motifs: boring? Not quite. Cléry A, et al. Curr Opin Struct Biol, 2008 Jun. PMID 18515081
  4. Vibrio Clade 3.0: New Vibrionaceae Evolutionary Units Using Genome-Based Approach. Jiang C, et al. Curr Microbiol, 2021 Dec 14. PMID 34905112

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
RNA-binding protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_AP025511.1 Reference assembly

    Range
    712523..712762 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_004732698.1 MULTISPECIES: RNA-binding protein [Vibrio]

    See identical proteins and their annotated locations for WP_004732698.1

    UniProtKB/TrEMBL
    A0A1A6LLC4, A0A1C3IU07, A0A2N7NKZ0, A0AA34XQY2, B7VTZ1
    Conserved Domains (1) summary
    smart00360
    Location:2 → 74
    RRM; RNA recognition motif
Nucleotide Protein
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